Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq113 497 1e-135 seq112 109 7e-19 >seq113 Length=1764599 Score = 497 bits (550), Expect = 1e-135 Identities = 1229/1849 (66%), Gaps = 22/1849 (1%) Strand=Plus/Minus Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075 || || || || || | ||||||||| ||||| || || || | |||| ||||| ||| Sbjct 1504275 GCCGGCTTGGTGCGCAAATAGTACATGCCCGTCTTCAGTCCCATCTTCCAGCCGTAGAAA 1504216 Query 62076 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62135 || || ||| || ||| ||| |||| || || | || || || | ||||| Sbjct 1504215 TGGATCGACGTCAGCTTGCCATAGTTCGGCTCGGCCACGTGTATGTTGAACGATTGTGAC 1504156 Query 62136 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 62195 |||||||| || || || | || ||||||||||| ||| ||| ||| | ||| ||| Sbjct 1504155 TGATCGATAAATGCCCCGCGATCGGCAGCCATTTTAATGCACGTTTTTACCGAAATCTCC 1504096 Query 62196 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG-GTTTGTAT--TCTGAATGGA 62251 || | ||||| || | |||| | | || | |||| | || || |||||||||| Sbjct 1504095 CACACCGTTTTGTAGAGGTCGCGGA-TCTCCTGCGGAATCGATTCAATGTTCTGAATGGA 1504037 Query 62252 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62311 ||| || | || ||| | ||||| || || || ||||| || | || | Sbjct 1504036 ACCATTATTAGACAAAATGTTGTTCTTCATATCGAGATCCCATAGGCCCATCGCAGTCAG 1503977 Query 62312 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 62371 | || || ||||| | || || || || || || || || | || | ||| |||| Sbjct 1503976 ATCTTGCAGTAGATGATGGTTCACCACCTGGAACTCGCCCGATAGCACACGTCGATTGTA 1503917 Query 62372 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62431 || || || ||||| || | |||||||| || ||||||||||| || || || || Sbjct 1503916 AACGTTCGACGTGTACGGCTCGAAAGACTCATTGTTGCCCAAAATTTGCGCCGTCGAAGC 1503857 Query 62432 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62491 |||||||| || |||| || || ||| | || |||| || ||| || ||||| Sbjct 1503856 GGTCGGCATCGGGGCCAACAGTAGCGAATTACGAATGCCGTGCTTTGCGATCTTCTCTTT 1503797 Query 62492 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 62551 || |||| ||||||||||||| |||| | ||| | ||| Sbjct 1503796 CAGCTCAGCCCAGTTCCAAAGATCCGTCGGTTCCTTCTTCCACATCTCGTATTGCAAAAT 1503737 Query 62552 ACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTT 62610 || || || | | || |||| ||||||| ||||| || |||||| | || | | Sbjct 1503736 GCCTTTGCTCACCGGACT-TCCTGCATATGTCTCGTACGGACCTTCCCGTGCTGCCAACT 1503678 Query 62611 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 62670 | || || || || | || || || ||||||| ||| || || | | ||| || | || Sbjct 1503677 CGCAGCTAGCTTCCAGCGCCCCATAGTAAATGGATTCAAATATTTGTTGATTCAGCTTTT 1503618 Query 62671 GTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAA 62730 |||| || ||| || ||||||| | | ||| || || || || | || || | Sbjct 1503617 GTGCCTCTTCGCTTTCGTATGGATAGCGCATCAAAATGAATGCATCGGCCATGCCCTGCA 1503558 Query 62731 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 62790 |||| |||||||| || ||||| | | |||| ||| | ||||| || | ||||| | Sbjct 1503557 CACCGATACCGATGGGCCTATGGCGCATATTGGAGCGCTTTGCTTCCGGTACCGGATAGT 1503498 Query 62791 AATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTT 62850 | || || || || ||||| || ||||| | || | ||| | ||||||||||| | Sbjct 1503497 AGTTGATGTCGATGATTTTGTTCAGATTGCGCGTAACGATCTTGGCGACATCCTTCAGCT 1503438 Query 62851 TGAGAAAATCAAATCGCC---CATCTATTACAAACATGTTCAAGGCAACAGATGCCAGAT 62907 | ||| || || || || | |||| |||||||||| |||| || ||||||| Sbjct 1503437 TCGCAAAGTCGTATGTCCTGTCAGCCTTTACGAACATGTTCAGTGCAATCGAGGCCAGAT 1503378 Query 62908 TACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTAC 62967 | ||||| || | ||||| || ||| | | || || ||||| | || | Sbjct 1503377 TGCAAACCGCAATCTCATCTTTCGACGAATACTCCACAATTTCGGTGCACAAGTTGGAGC 1503318 Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027 |||| || ||||| | || ||||| || || || || || |||||||| || || | Sbjct 1503317 ACTTAATGGTTCCAACGTTCTGTTGGTTGCTTTTACGATTGCATGCATCCTTGTACAGCA 1503258 Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087 | | || || ||||| | ||| ||||| || ||||| ||| | || | |||| Sbjct 1503257 TATACGGTACGCCCGTTTCCACCTGCGATTCAATGATCGCGAACCACAAATCTTGCGCCT 1503198 Query 63088 TTA-TTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGT-TCGAACTC 63145 | | | | || | | | | ||| ||||||| || ||| | ||| |||||||| Sbjct 1503197 TCACCTGTCGA-ATAAAGCGTCCCTCTTTTTCGTAACCGGTGTAC-AGCGTCTCGAACTC 1503140 Query 63146 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 63205 || |||||| | ||||||| ||||| || | |||||||||| |||| | | Sbjct 1503139 TTCGCCCCAAGTTTCTGCCAATCCGGGACAATCGTGAGGACACATCAGGCTCCACATTTC 1503080 Query 63206 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63265 || ||| || || ||||| || || || || ||||| || || || | | || || Sbjct 1503079 GTTCGCCTCTACCCGCTTCATGAACAGGTCCGGTATCCACAGTGC-GTAGA-ACATGTCG 1503022 Query 63266 GGTTCTATG---TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 63322 || | | | ||||| || || || ||||| || ||||| || ||| | | | ||| Sbjct 1503021 CGTGC-ACGCACCTCCTCCTTGCCGGTGTTCTTCTTTAGATCCAGAAACTCGAATACATC 1502963 Query 63323 AGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATC 63382 ||||| ||||| | ||||||||| | | |||| ||||||||||| || ||||| || Sbjct 1502962 GCCGTGCCATGGTTCGAGGTATATGGCAAAAGCTCCCGGCCGTTTGTTGCCACCCTGGTC 1502903 Query 63383 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACC 63442 | || | ||| || || || || || | || |||||| | | ||||| || || || Sbjct 1502902 CACATACCGAGCCGTATTGTTGTACACGCGCAGCATTGGTACCAATCCGTTCGAAATCCC 1502843 Query 63443 ATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACCTATTC 63501 || ||||||||||| || |||| | ||||||||| | | | | || || |||| Sbjct 1502842 GTTCGTACCGGAGATGTACGTTCCCTTCGCACGAATA-CAGTGCACGTTCAGCCCAATTC 1502784 Query 63502 CCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGC 63561 | || || ||| || || | ||||| | || | |||||| |||||||| || || | Sbjct 1502783 CGCCAGCAGATTTTGAAATCAGCGCGCACTGCTTCAGCGTGTCGTAGATACCTTCAATAC 1502724 Query 63562 TATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCAT 63621 | || || |||| | || ||||||||| |||| || | || ||| |||| Sbjct 1502723 TGTCGTCAGACATGGTTAGCAGAAAACAGGATGACAACTGCGGGCGCTGCGTTGCCGCTG 1502664 Query 63622 TAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAA 63681 || | |||||| || || || ||||| | || || || | |||||| ||||| | Sbjct 1502663 CGAACATGGTAGGTGAGGCATGGGTAAAGTAGCGCTCCGACAGCAAATTGTATGTCTCGA 1502604 Query 63682 TAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAG 63741 | |||| || ||||| |||||| || | || || ||||| ||||||||||| | Sbjct 1502603 TGGCTGCATCGATATCTTCACCATGAATACCGATCGCAACGCGCATCAACATGTGCTGCG 1502544 Query 63742 GTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAAC 63801 ||| ||||||||||||| || ||||||| |||||| |||||||||||| || | Sbjct 1502543 GTCGTTCAACGATCTTGCCCCGGATCTTCAACAGATAGGATCGTTCCAAAGTTTTGAAGC 1502484 Query 63802 CAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850 | |||||||||||| ||| || || |||||||| ||| |||| || || Sbjct 1502483 CGAAATAGTTGTATCCAAAATCACGATCGTAAATGATAGCCGAATTCAG 1502435 >seq112 Length=21277816 Score = 109 bits (120), Expect = 7e-19 Identities = 181/259 (70%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 33292 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 33351 || ||||||| || || || || |||||||| || ||||| | ||| || ||||| Sbjct 19493296 TTGAACATCAGGCAGGCAAAGTCACAGTGCAGTCCTTCGTCGCGTGAAATCAGCTCGTTC 19493355 Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411 || || || ||||| ||||| ||||| ||||| || ||||| || |||| || || Sbjct 19493356 GAGAAGGTCAGTCCCGGCATAAGGCCTCGCTTCTTTAGCCAGAAAATGGCGGCAAAGCTA 19493415 Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33471 || |||||||||||||| || || ||||| || | | | || ||| | || Sbjct 19493416 CCGCTGAAGAAGATTCCTTCGACAGCCGCAAACGCTACGACACGTTCGCCAAAGTTTGC- 19493474 Query 33472 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 33526 || || || ||||| || | ||||| || |||||||| || || || |||| || Sbjct 19493475 CT-TCTTGCTCGAGATCCAGTTCAGTGCCCAGTCTGCCTTCTTCTTCACGCACGGCAACG 19493533 Query 33527 TTTCTATGGCATTAAAGAG 33545 |||| |||||||| || || Sbjct 19493534 TTTCAATGGCATTGAATAG 19493552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622941920522480