Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq113 239 1e-57 seq179 156 1e-32 >seq113 Length=1764599 Score = 239 bits (264), Expect = 1e-57 Identities = 692/1052 (66%), Gaps = 21/1052 (2%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 || |||||||| |||||||| ||||| ||||| ||||| || ||||| ||| | ||| Sbjct 1502531 ATCGTTGAACGACCGCAGCACATGTTGATGCGCGTTGCGATCGGTATTCATGGTGAAGAT 1502590 Query 363502 GTTGATGCCGCGATTGAAACATATAA---GCT-TCTAAGTGCTCGTGTATTCACGCACGC 363557 | ||||| || || || ||||| || ||| || || ||| | || | || || Sbjct 1502591 ATCGATGCAGCCATCGAGACATACAATTTGCTGTCGGAGCGCTACTTTA----CCCATGC 1502646 Query 363558 CACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCT 363617 | | || || |||| | || | ||| | || ||| |||| || || ||||| || Sbjct 1502647 CTCACCTACCATGTTCGCAGCGGCAACGCAGCGCCCGCAGTTGTCATCCTGTTTTCTGCT 1502706 Query 363618 AAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTAT 363677 || ||| ||||| || || ||||||| ||||| || ||| | || || || || Sbjct 1502707 AACCATGTCTGACGACAGTATTGAAGGTATCTACGACACGCTGAAGCAGTGCGCGCTGAT 1502766 Query 363678 TTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACAGAACAGTT 363736 ||| || ||| ||||||||||| | | || | ||| | ||||||| || | | Sbjct 1502767 TTCAAAATCTGCTGGCGGAATTGGGCTGAACG-TGCACTGTATTCGTGCGAAGGGAACGT 1502825 Query 363737 ACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795 |||| ||| || | ||||| ||||| || |||| || ||||| || |||| || Sbjct 1502826 ACATCTCCGGTACGAACGGGATT-TCGAACGGATTGGTACCAATGCTGCGCGTGTACAAC 1502884 Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855 ||||| || |||| || ||||||||||| || || || || ||||| || || Sbjct 1502885 AATACGGCTCGGTATGTGGACCAGGGTGGCAACAAACGGCCGGGAGCTTTTGCCATATAC 1502944 Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAA 363915 ||||| || || | |||| | || |||||||| || || ||| ||||| || || Sbjct 1502945 CTCGAACCATGGCACGGCGATGTATTCGAGTTTCTGGATCTAAAGAAGAACACCGGCAAG 1503004 Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAG 363975 ||||| |||||||||| || ||||||| ||||| ||| | | |||| || |||||| Sbjct 1503005 GAGGAGGTGCGTGCACGCGACATGTTCTACGCACTGTGGATACCGGACCTGTTCATGAAG 1503064 Query 363976 CGCGTGGAGGCAGGTAAGAA--TTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTT 364033 || || ||||| | | ||| ||| || | || || ||||| ||||| || | Sbjct 1503065 CGGGTAGAGGC--GAACGAAATGTGGAGCCTGATGTGTCCTCACGATTGTCCCGGATTGG 1503122 Query 364034 CCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGG 364093 | || ||||| || || | | | || ||| || ||| ||||| | | Sbjct 1503123 CAGAAACTTGGGGCGAAGAGTTCGAGACGCTGTACACCGGTTACGAAAAAGAGGG-ACGC 1503181 Query 364094 CTCGTAAGACA-ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAG 364152 | | |||| | || || | | ||||| || ||||| || |||||| | || Sbjct 1503182 TTTATTCGACAGGTGAAGGCGCAAGATTTGTGGTTCGCGATCATTGAATCGCAGGTGGAA 1503241 Query 364153 ACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCAC 364212 || || ||| |||||| ||||||| ||| | ||||| || || |||||| ||| || Sbjct 1503242 ACGGGCGTACCGTATATGCTGTACAAGGATGCATGCAATCGTAAAAGCAACCAACAGAAC 1503301 Query 364213 CTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272 |||| || ||| || |||| | || ||||| ||| | || || | | || Sbjct 1503302 GTTGGAACCATTAAGTGCTCCAACTTGTGCACCGAAATTGTGGAGTATTCGTCGAAAGAT 1503361 Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATG---GT 364329 |||| ||| || || || || || ||||| || || ||| ||||| | || | Sbjct 1503362 GAGATTGCGGTTTGCAATCTGGCCTCGATTGCACTGAACATGTTCGTAAAGGCTGACAGG 1503421 Query 364330 ACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAG 364389 || | ||| | | || | || || || | | ||| ||||||| |||| Sbjct 1503422 ACATACGACTTTGCGAAGCTGAAGGATGTCGCCAAGATCGTTACGCGCAATCTGAACAAA 1503481 Query 364390 GTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGC 364449 | ||||||| || || ||||| | || ||||| |||| || |||||||| ||| | Sbjct 1503482 ATCATCGACATCAACTACTATCCGGTACCGGAAGCAAAGCGCTCCAATATGCGCCATAGG 1503541 Query 364450 CCGATTGGTCTTGGTGTACAGGGCCTCGCTGA 364481 || || ||| | ||||| |||||| | || || Sbjct 1503542 CCCATCGGTATCGGTGTGCAGGGCATGGCCGA 1503573 Score = 111 bits (122), Expect = 4e-19 Identities = 275/413 (67%), Gaps = 12/413 (3%) Strand=Plus/Plus Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || || ||||| || ||||| || || || || | || ||||| |||| ||||| ||| Sbjct 1503842 GCCCCGATGCCGACCGCTTCGACGGCGCAAATTTTGGGCAACAATGAGTCTTTCGAGCCG 1503901 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 | || || |||| || || || || || || || || | ||| || || | Sbjct 1503902 TACACGTCGAACGTTTACAATCGACGTGTGCTATCGGGCGAGTTCCAGGTGGTGAACCAT 1503961 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCG----GGCTGTGGGGTGACAGCATGAAGAACTA 364925 | ||| | | ||||| ||| ||| | || |||| | | ||||||||| | Sbjct 1503962 CATCTACTGCAAGATCT----GACTGCGATGGGCCTATGGGATCTCGATATGAAGAACAA 1504017 Query 364926 TATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAG-GATTTC-CAGAAGATCTGAAG 364983 || | | ||||||||| | ||||||||| | |||| | ||| ||||| | Sbjct 1504018 CATTTTGTCTAATAATGGTTCCATTCAGAACATTGAATCGATTCCGCAGGAGATCCGCGA 1504077 Query 364984 CCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGAT 365043 ||| | ||||||| || ||||| ||||| | ||| |||| | ||||| |||||| Sbjct 1504078 CCTCT--ACAAAACGGTGTGGGAGATTTCGGTAAAAACGTGCATTAAAATGGCTGCCGAT 1504135 Query 365044 CGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCC 365103 ||||| || |||||| |||| || ||||| ||| || | || | |||| | || Sbjct 1504136 CGCGGGGCATTTATCGATCAGTCACAATCGTTCAACATACACGTGGCCGAGCCGAACTAT 1504195 Query 365104 GCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||||| || || || ||||||||||| ||||| || || ||||| || Sbjct 1504196 GGCAAGCTGACGTCGATCCATTTCTACGGCTGGAAGATGGGACTGAAGACGGG 1504248 >seq179 Length=1335352 Score = 156 bits (172), Expect = 1e-32 Identities = 223/309 (72%), Gaps = 4/309 (1%) Strand=Plus/Plus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 |||||| | || ||||||||||| ||||| |||||||||||||||||| ||||||| Sbjct 1075635 AGGTGACTTAGGTCCAGTTTACGGCTTTCAGTGGCGCCACTTTGGTGCAACATACAAAA- 1075693 Query 111548 CATG-CACGACTCATATGATTCACAGGGAACTGATCAA-TTACAGAATGTCATTGATCAA 111605 |||| |||||| |||| |||||||| ||||||| | ||| |||| || | || Sbjct 1075694 CATGCCACGACGATTATGCAGGACAGGGAATTGATCAACTGGCAG-ATGTGATCCACAAA 1075752 Query 111606 ATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTG 111665 || |||||||| ||| | |||||| ||||| ||||| || ||||| || | | Sbjct 1075753 ATAAAGAACAATCCACATGATCGTCGAATTATCATGAGCGCTTGGAATCCTTCCGATATA 1075812 Query 111666 GAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATG 111725 || ||||| ||||| || ||||| | || ||||||| ||| || || Sbjct 1075813 CCCAACATGGCCCTTCCGCCTTGTCACTGTTTGGCACAGTTTTTTGTTGGTGATGGAGAA 1075872 Query 111726 CTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATT 111785 || || ||||| ||||||||||| || || ||| |||| | || ||||| ||||| ||| Sbjct 1075873 CTGTCTTGCCAGATGTATCAGCGGTCGGCCGATGTTGGGTTGGGCGTTCCTTTTAACATT 1075932 Query 111786 GCAAGTTAC 111794 || || ||| Sbjct 1075933 GCCAGCTAC 1075941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303342277930196