Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq334 143 2e-29
seq646 109 4e-19
seq1 82.4 5e-11
>seq334
Length=15145372
Score = 143 bits (158), Expect = 2e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221
|||| ||| | ||||| ||||| |||||| | || |||||||| ||||| |||||
Sbjct 2557305 ATGGCTACCGTAAACGTGAATCGCAATGTGACCGATATCTTCTACCGTTACAAGATGCCT 2557364
Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281
|||||| || ||||| |||||||| || ||||| |||||||| || || || ||||||
Sbjct 2557365 CGCATCAATGCTAAGGTAGAGGGTAAAGGCAACGGCATTAAAACGGTGATCGTGAACATG 2557424
Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGC 6341
| || || || ||| | || || ||||| ||||| |||||||| || || || |||
Sbjct 2557425 GCCGAGGTGGCCCGCGCGATTGGTCGTCCTGCAACCTATCCGACGAAGTACTTTGGTTGC 2557484
Query 6342 GAACTTGGCGCTCAGACGCAGTTTGATCACAA 6373
|||||||| || || || || || || || ||
Sbjct 2557485 GAACTTGGAGCACAAACTCAATTCGACCATAA 2557516
>seq646
Length=9740529
Score = 109 bits (120), Expect = 4e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | || || | ||||| |||||| || |||||| ||||| ||||| || |||
Sbjct 6802126 CCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 6802067
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| || |||| || | || || |||||||| || || || || ||||| | |||
Sbjct 6802066 AGTGTGCGACCGTCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGG 6802007
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||| || || ||| || || ||||||||||| || ||||| || ||
Sbjct 6802006 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 6801947
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| | ||||| ||||||||||| | |||||| ||||| |||||||| ||
Sbjct 6801946 TCAAGGGTAATGGTTTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 6801897
Score = 93.3 bits (102), Expect = 3e-14
Identities = 161/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147
|||||||| | | |||| ||||| ||| || || ||||| ||||| ||||| ||
Sbjct 9473347 TTACCACCACGGAGTCGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCC 9473288
Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207
|||| | || | || || | || || ||||| || || || || || ||||| | |
Sbjct 9473287 GACAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGG 9473228
Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267
|||| ||||| || ||| || ||| ||||||||| | || || || | ||
Sbjct 9473227 GGGATTCCTTCCTTATCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCG 9473168
Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
|| || | ||| || || || || || | ||||||||||| ||||||||| ||
Sbjct 9473167 ACCTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGATT 9473114
>seq1
Length=31626230
Score = 82.4 bits (90), Expect = 5e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | || ||| | |||| |||||| || ||||| ||||| || ||||| |||
Sbjct 15287664 CCACCACGCAGACGAAGGACCAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCCGAC 15287605
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | || | || || | || || || || || || || || || ||||| | |||
Sbjct 15287604 AGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGG 15287545
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| || || |||||| ||| || ||| || |||| || ||||| | || ||
Sbjct 15287544 ATTCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTCTCGATGGTATCGGAAGGCTCCACC 15287485
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| | || || || || || |||| ||| || ||||| |||||||||||
Sbjct 15287484 TCAAGGGTGATCGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCATGTT 15287435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334944432289418
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |