Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq112 174 1e-38 >seq112 Length=21277816 Score = 174 bits (192), Expect = 1e-38 Identities = 328/472 (69%), Gaps = 14/472 (3%) Strand=Plus/Minus Query 50983 ACGTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTTG 51042 ||||||||||||||||| || ||| | |||||||| ||||||||| |||| ||||||| | Sbjct 19215827 ACGTTAAACTTACGCTTGCATCCCTCATAGTTCATGTACCTGATTTTGCCGAAAATTTCG 19215768 Query 51043 CGTTCTTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACATAATT 51101 || || || | |||| ||||| | || || |||||||| || || || || Sbjct 19215767 CGCTCCTTCCA-TCCCTGATCGTGTATGCCCGCGATCGACCACATGCACCCGACGTACCC 19215709 Query 51102 GTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAAC-CCAATG 51160 ||| |||||||| ||||||| |||||| ||||||| ||| | || || || | | | | Sbjct 19215708 GTTCGGATCGCGCCCATCCAGGCTGTACCGATCGTTCAGATAGATCGC-TATCTCGAGCG 19215650 Query 51161 CCATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAAC 51220 | ||| | | ||||| |||| || ||||||||||||||||| |||| | | Sbjct 19215649 CTTCGTCGGGTGTTTTTGTCCACTCCAGTATCTTCTTGGCCCAGTACATCCGCAGAAAGC 19215590 Query 51221 CGTGCATCTTGCCCTC--GCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTG 51278 ||||||| |||||||| ||| | | |||| || ||||||||||||| |||||||| Sbjct 19215589 CGTGCATTTTGCCCTCCTGCACC--ATCTGCAGCTGGGCCGAGTTCCACAGATCGTCGTG 19215532 Query 51279 AGTTTGGCAACTTGCCAGCTCTGTCAAATTGTAAATGTATGAGCGATGATCGTATTTGTG 51338 |||| | || |||||||| | |||| ||| || | ||| | || Sbjct 19215531 CGTTTTGGCCGTTTCCAGCTCTTCCCGGGTGTAGCAGTACACCCGCTTATCCTTCCGATG 19215472 Query 51339 TTGCTCGATCGTTTCTTGAGCCCATTGTGGTGCG---CCTTCAACACAGTCGTAGCGGTC 51395 | || | ||||| | ||||| | || || ||||| | | ||||||| || Sbjct 19215471 GTCTTCCAGCGTTTTACGGGCCCA--CTCGTACGCACCCTTC-AGATTGTCGTAGTTTTC 19215415 Query 51396 GTTGTAGAAACAAAAATTGTCGGCCAGTTCGCGGCGTACCACGACTTCGTCG 51447 |||| | ||||||||||| | ||| ||||||||||| | |||| ||| Sbjct 19215414 ATTGTGCAGGCAAAAATTGTCCGACAGCTCGCGGCGTACGATCGCTTCCTCG 19215363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433324419356570