Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq112 114 1e-20 seq334 111 2e-19 >seq112 Length=21277816 Score = 114 bits (126), Expect = 1e-20 Identities = 192/274 (70%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 || || || | ||| || ||||||| ||| || ||||| || || ||||| ||||| Sbjct 19493656 GAGTCACGAACGTACGTGTCGATTAGCAGTGAGTACATCTCGCTGTGCACATTTTCCATC 19493715 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472 || ||||| || ||||| || || | || ||||| | ||| || || || || | | Sbjct 19493716 GCTATTTGAAACCCGTAAAAGCAGCGTGCCTCCGTTACCTGTACCTCCTGGCTGAAGCGC 19493775 Query 93473 TCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTT 93532 || || || ||||| || || |||||||||||||| ||||| || || | | ||| Sbjct 19493776 TCCACCAGGTTTTCGTTAACGATACCATCGGATGCGGCAAAGAAGGCAAGCACGTGCGAG 19493835 Query 93533 ATAAAATG--TTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGAT 93590 || ||||| ||| | || ||| ||| |||||||| | || || || |||| Sbjct 19493836 ATGAAATGACGTTCGC-TC-GGTTTCAGCGATTCCCAATCCTTCATGTCCTTGGAGAGAT 19493893 Query 93591 CGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 |||| ||||| || |||||||| || ||||| || Sbjct 19493894 CGACCTCTTCCACGGTCCAAAAGGAAGCTTCCGC 19493927 >seq334 Length=15145372 Score = 111 bits (122), Expect = 2e-19 Identities = 76/85 (89%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 6208417 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 6208358 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 6208357 GTGGGTTCGAACCCCACTTCTGACA 6208333 Score = 105 bits (116), Expect = 7e-18 Identities = 75/85 (88%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 ||||| |||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 6220836 GTCAGAATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGCG 6220895 Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348 |||||||||||||||| ||||||| Sbjct 6220896 TGGGTTCGAACCCCACTTCTGACAA 6220920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556856080604720