Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq113 273 2e-68 seq1 123 2e-23 seq646 113 4e-20 seq146 86.0 5e-12 >seq113 Length=1764599 Score = 273 bits (302), Expect = 2e-68 Identities = 1065/1651 (65%), Gaps = 50/1651 (3%) Strand=Plus/Minus Query 128775 CGACTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACAT 128834 ||| ||||| || || || | || || | | |||||||||||||||||||||||||| Sbjct 1504309 CGATTTGTCTACCGTGAACTGGATTGCATTAACGGCCGGCTTGGTGCGCAAATAGTACAT 1504250 Query 128835 GCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGT 128894 ||| || |||| || | ||||| || | || |||| |||| | | ||| | Sbjct 1504249 GCCCGTCTTCAGTCCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATAGTT 1504190 Query 128895 GGGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGC 128954 || | || || || || ||||| ||||| ||||| | ||||||||||| Sbjct 1504189 CGGCTCGGCCACGTGTATGTTGAACGATTGTGACTGATCGATAAATGCCCCGCGATCGGC 1504130 Query 128955 AGCCATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCAC 129014 |||||| ||| | |||| || || ||||||||||||||||| || || | | Sbjct 1504129 AGCCATTTTAATGCACGTTTTTACCGAAATCTCCCACACCGTTTTGTAGAGGTCGCGGAT 1504070 Query 129015 GTGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCG 129074 | | || || |||||||||||| | | || || || | | ||| ||||| Sbjct 1504069 CTCCTGCGGAATCGATTCAATGTTCTGAATGGAACCATTATTAGACAAAATGTTGTTCTT 1504010 Query 129075 CATCT---GTTCG--TTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTT 129129 ||| | | || | | | | |||| |||| || | | | | ||| Sbjct 1504009 CATATCGAGATCCCATAGGCCCATCGCAGTCAGATCTTGCAGTAGATGATG-----GTTC 1503955 Query 129130 ATTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCA 129189 | || || || || |||| | || || ||| ||||| ||| ||| ||||||| Sbjct 1503954 ACCACCTGGAACTCGCCCGATAGCACACGTCGATTGTAAACGTTCGACGTGTACGGCTCG 1503895 Query 129190 AACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAA 129249 || || ||||||||||| || ||||| ||||| | ||||| ||||| |||| Sbjct 1503894 AAAGACTCATTGTTGCCCAAAATTTGCGCCGTCGAAGCGGTCGGCATCGGGGCCAACAGT 1503835 Query 129250 AGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATC 129309 ||||| || || | ||||||| | || | | ||| | | | ||||| ||| | Sbjct 1503834 AGCGAATTACGAATGCCGTGCTTTGCGATCTTCTCTTTCAGCTCAGCCCAGTTCCAAA-- 1503777 Query 129310 GAT--GTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGG 129367 ||| || ||| | ||||||| ||||||||||| || || || | ||||| Sbjct 1503776 GATCCGTCGGTTCCTTCTTCCACATCTCGTATTGCAAAATGCCTTTGCTCACCGGACTTC 1503717 Query 129368 AAAAGTAGGAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGC 129427 || | |||| | || | | |||||| ||||| || ||||||| || | Sbjct 1503716 CTGCATATGTCTCGTACGGACCTTCCCGTGCTGCCAACTCGCAGCTAGCTTCCAGCGCCC 1503657 Query 129428 CAAAATAAATTGTTTCGGCAAT-TTTGGTG-TTCAACACTTTGGCCTGGTCGCTTTCGTA 129485 || | ||||| | ||| ||| |||| || |||| | || |||| ||||||||||| Sbjct 1503656 CATAGTAAATGGATTCA--AATATTTGTTGATTCAGCTTTTGTGCCTCTTCGCTTTCGTA 1503599 Query 129486 CGGCATA-CGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTC 129544 || ||| |||| || |||| ||||||| || || | ||| | ||||||||| | Sbjct 1503598 TGG-ATAGCGCATCAAAATGAATGCATCGGCCATGCCCTGCACACCGATACCGATGGGCC 1503540 Query 129545 GATGTTTTCTATTGGATT--TTTG-TGCCGACAACAAGGGATAGTAGTTGATGTCTATAA 129601 ||| ||||||| |||| | ||| | | ||||||||||||||||| || | Sbjct 1503539 TATGGCGCATATTGGAGCGCTTTGCTTCCGGTACC---GGATAGTAGTTGATGTCGATGA 1503483 Query 129602 TTTTGTTTAAATTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACT 129661 ||||||| | ||| || || || | || | || | | | |||| | ||| | Sbjct 1503482 TTTTGTTCAGATTGCGCGTAACGATCTTGGCGACATCCTTCAGCTTCGCAAAGTCGTA-T 1503424 Query 129662 CGCCTA-CATCGATGTCGA-CAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGC 129719 ||| || | | ||| || || | || ||||||||||| |||||| || || Sbjct 1503423 GTCCTGTCAGCCTTTACGAACATGTTCAGTGC----AATCGAGGCCAGATTGCAAACCGC 1503368 Query 129720 ACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGT 129779 | | || | ||| ||||| |||||||||| |||||| || |||||||| Sbjct 1503367 AATCTCATCTTTCGACGAATACTCCACAATTTCGGTGCACAAGTTGGAGCACTTAATGGT 1503308 Query 129780 GCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGT 129839 || | | || ||| || ||||| ||||| ||||| ||||||| ||| ||||| Sbjct 1503307 TCCAACGTTCTGTTGGTTGCTTTTACGATTGCATGCATCCTTGTACAGCATATACGGTAC 1503248 Query 129840 GCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGA---ACAAGTCTCGAGCCTTGATCTG 129896 ||||||||| || |||| || ||||| || || |||| ||| | ||||| | ||| Sbjct 1503247 GCCCGTTTCCACCTGCGATT---CAATGATCGCGAACCACAAATCTTGCGCCTTCACCTG 1503191 Query 129897 TCTTACAAATTTGCCACATTTCTCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTG 129956 || | ||| || ||| ||||| | ||||| || || ||| ||| Sbjct 1503190 TCGAATAAAGCGTCCCTCTTTTTCGTAACCGGTGTACAGCGTCTCGAACTCTTCGCC--- 1503134 Query 129957 TACGGTGTCGAGCAA---CGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGC 130013 || || ||| || | || | |||||||||| ||||||||| | | ||| Sbjct 1503133 CCAAGTTTCTGCCAATCCGGGACAATCGTGAGGACACATCAGGCTCCACATTTCGTTCGC 1503074 Query 130014 TTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTT 130073 || || || ||||| |||| || |||| |||||| ||||| |||| || || || Sbjct 1503073 CTCTACCCGCTTCATGAACAGGTCCGGTATCCACAGTGCGTAGAACATGTCGCGTGCACG 1503014 Query 130074 TCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCA 130133 ||||| || |||| || || || || || ||| | | ||| ||||||| Sbjct 1503013 CACCTCCTCCTTGCCGGTGTTCTTCTTTAGATCCAGAAACTCGAATACATCGCCGTGCCA 1502954 Query 130134 CGGTTCAACATAAATTGCCATTGCGCCCTTCCGT---TTGCCCCCTTGGTCAACGTGGCG 130190 ||||| | || || || | || ||| |||| ||||| || ||||| || | || Sbjct 1502953 TGGTTCGAGGTATATGGCAAAAGCTCCCGGCCGTTTGTTGCCACCCTGGTCCACATACCG 1502894 Query 130191 CACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCT 130250 | | ||||||||| || |||| ||||| |||||||||| | | ||||| || | Sbjct 1502893 AGCCGTATTGTTGTACACGCGCAGCATTGGTACCAATCCGTTCGAAATCCCGTTCGTACC 1502834 Query 130251 CTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCCAAA 130310 ||| | | || || |||| || ||| | || || || ||||| || | Sbjct 1502833 GGAGATGTACGTTCCCTTCGCACGAATACAGTGCACGTTCAGCCCAATTCCGCCAGCAGA 1502774 Query 130311 TTTTGATATCAACGCGCAATCGCGT-AGCGTTTCATAAATGCCAACGATACTGTCTTCTT 130369 |||||| |||| |||||| | || | ||||| || || || || | |||||||| || Sbjct 1502773 TTTTGAAATCAGCGCGCACT-GCTTCAGCGTGTCGTAGATACCTTCAATACTGTCGTCAG 1502715 Query 130370 TAATGTTTAGGAGGAAACACGAGGCCAATTG 130400 ||| |||| || ||||| || | ||| || Sbjct 1502714 ACATGGTTAGCAGAAAACAGGATGACAACTG 1502684 >seq1 Length=31626230 Score = 123 bits (136), Expect = 2e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || ||||| || || || || || | || || || ||| |||| ||||| ||||| Sbjct 15287432 GTTAACATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACGATCACCCTTGAGGTGGAG 15287491 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 | |||||||| | || | | || || ||||| ||||||||||| || ||||| Sbjct 15287492 CCTTCCGATACCATCGAGAACGTTAAGGCCAAGATTCAGGACAAGGAGGGAATCCCACCA 15287551 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 ||||| || ||||| || || || ||||| ||| | |||||| |||||| | || ||| Sbjct 15287552 GATCAGCAGCGTCTGATCTTCGCAGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCGGAT 15287611 Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || |||||||| || ||||| ||| | ||| | || | || |||| || || Sbjct 15287612 TATAACATTCAGAAGGAATCGACCCTTCATCTGGTCCTTCGTCTGCGTGGTGG 15287664 Score = 111 bits (122), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| ||||| ||||| ||||||||| |||| ||||| | | || | Sbjct 15284794 ATGCAGATCTTTGTAAAAACGTTAACGGGTAAAACGATCACCCTTGATGCTGTCGCCTCG 15284853 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAG-GAGGGTATTCCACCCGATCA 22337 || || || || |||||| | ||||| || | | | ||||||||| ||||||| || Sbjct 15284854 GAGACGGTTTTGGACATCAAAAATAAAAT-CATGGAACGCGAGGGTATTGCACCCGACCA 15284912 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || ||| |||| ||||||||||||||||| || || || | | | || |||||||| Sbjct 15284913 GCAGCGTATTATCTTTGCCGGCAAACAGTTGGATGAGGGTCGGATCATATCTGATTACAA 15284972 Query 22398 CATTCAAAAAGAATCCACCATACAT 22422 || || | | ||| || || ||| Sbjct 15284973 TATCCAGCACGGATCAACGATGCAT 15284997 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || ||||| || ||||| || || ||||| || Sbjct 27268285 AAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAGCAGCGTCTGATCTTCGCCGGTAAG 27268344 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | || ||| ||||| | ||||| |||||||| || || || || ||| | || Sbjct 27268345 CAGCTGGAAGATGGACGCACTCTGTCCGACTACAACATCCAGAAGGAGTCGACCTTGCAC 27268404 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || || | || |||| |||||| Sbjct 27268405 TTGGTCCTCCGTCTGCGTGGAGGT 27268428 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || ||||| || ||||| || || ||||| || Sbjct 27268513 AAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAGCAGCGTCTGATCTTCGCCGGTAAG 27268572 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | || || ||||| | ||||| |||||||| || || || || ||| | || Sbjct 27268573 CAGCTGGAAGACGGACGCACTCTGTCCGACTACAACATCCAGAAGGAGTCGACCTTGCAC 27268632 Query 22423 TTAGTTTTGCGATTGCGCGGAGG 22445 || || | || ||||||| || Sbjct 27268633 TTGGTCCTCCGTCTGCGCGGGGG 27268655 >seq646 Length=9740529 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || ||||| | || |||||||| | || ||||| || || || Sbjct 6801897 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAAACCATTACCCTTGAGGTCGAGCCC 6801956 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | || || || || || |||||||| || || || ||| Sbjct 6801957 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCGCCGGAT 6802016 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || |||||||| || ||| | ||||| ||||| | ||||| ||| Sbjct 6802017 CAGCAGCGTCTGATCTTTGCCGGTAAGCAGCTGGAGGACGGTCGCACACTGTCCGACTAC 6802076 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| || || || ||| | ||| | || | || ||||||| || Sbjct 6802077 AACATTCAGAAGGAGTCGACCCTTCATCTGGTGCTTCGCCTGCGCGGTGG 6802126 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || ||||| | ||||| || || |||| ||||| || || | | Sbjct 9473118 ATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCG 9473177 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||| || || || ||||| || || || || ||||| Sbjct 9473178 GACACGATCGAAAATGTGAAGGCAAAGATCCAGGATAAGGAAGGAATCCCCCCGGATCAG 9473237 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | |||||| ||||| | || || |||||| Sbjct 9473238 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTGTCGGACTACAAC 9473297 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || ||||| ||| | ||| | || ||||| | || || ||| Sbjct 9473298 ATTCAGAAGGAATCTACCCTCCATCTGGTGCTGCGACTCCGTGGTGGT 9473345 >seq146 Length=1450147 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 108830 CAATGTTTCCAAGATCGCCAACGTGCCGGTCAAGATTGTTTGGTCCGCCGTGATTTTTGT 108889 |||||||||| | || || | ||||| || | | | || | ||||| ||||| Sbjct 688704 CAATGTTTCCCATGTCACCGGCATGCCGCTCGTCAGCGGTCGGCGCTCCGTGTGTTTTGC 688645 Query 108890 TGTACGGATTGTAGTGTTCGCCCGCCGATGTGCAACCGTTGCTCATGTCGCCGTATTCAT 108949 || ||||||| |||| |||||| ||| ||||||||||| | |||||||| | |||| Sbjct 688644 CGTGCGGATTGAAGTGAGCGCCCGTCGACATGCAACCGTTGGTGTTGTCGCCGAACTCAT 688585 Query 108950 GAATGTGAAATCCAT 108964 ||||||| ||||||| Sbjct 688584 GAATGTGGAATCCAT 688570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419724531735070