Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq35 93.3 9e-14
seq657 91.5 3e-13
seq646 91.5 3e-13
seq556 91.5 3e-13
seq24 91.5 3e-13
seq1 91.5 3e-13
seq668 89.7 1e-12
seq112 89.7 1e-12
>seq35
Length=5844712
Score = 93.3 bits (102), Expect = 9e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559
|| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 2839522 GACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 2839463
Query 142560 GAGCCCCACATCGGGC 142575
||||||||| | ||||
Sbjct 2839462 GAGCCCCACGTTGGGC 2839447
Score = 93.3 bits (102), Expect = 9e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559
|| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 2841532 GACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 2841591
Query 142560 GAGCCCCACATCGGGC 142575
||||||||| | ||||
Sbjct 2841592 GAGCCCCACGTTGGGC 2841607
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 2875706 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2875765
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 2875766 CCCACGTTGGGC 2875777
>seq657
Length=9220809
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 8533407 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 8533466
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 8533467 CCCCACGTTGGGC 8533479
>seq646
Length=9740529
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 3610979 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 3611038
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 3611039 CCCCACGTTGGGC 3611051
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 6124427 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 6124486
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 6124487 CCCCACGTTGGGC 6124499
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 6120435 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 6120376
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 6120375 CCCACGTTGGGC 6120364
>seq556
Length=10313149
Score = 91.5 bits (100), Expect = 3e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
|| |||||| |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 10050215 ATCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 10050156
Query 142561 AGCCCCACATCGGGC 142575
|||||||| | ||||
Sbjct 10050155 AGCCCCACGTTGGGC 10050141
>seq24
Length=5879236
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1863266 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1863325
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 1863326 CCCCACGTTGGGC 1863338
>seq1
Length=31626230
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 5997350 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5997291
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 5997290 CCCCACGTTGGGC 5997278
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 23466493 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 23466552
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 23466553 CCCACGTTGGGC 23466564
>seq668
Length=6225679
Score = 89.7 bits (98), Expect = 1e-12
Identities = 238/358 (66%), Gaps = 8/358 (2%)
Strand=Plus/Minus
Query 218654 TTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGC 218713
||||||| || ||||| | || | || | || | || | ||||||||||||||| |
Sbjct 1120434 TTAAGGTAGCCCAGTTGGCCGGATCGGTTGCAGAGAAGTCGGCCTACCATCACGGTGAAC 1120375
Query 218714 AGAGTCTGCAGGGTGCCATTGTAGGCA---TGGCACAGGACTATGTGGGCAGTAACAACA 218770
|| || || || | | | | || |||| ||| ||||||| || || || ||||
Sbjct 1120374 AG--TC-GCTCTGTTCGACGATCGTCAATTTGGCCCAGAACTATGTCGGAAGCAATAACA 1120318
Query 218771 TGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTG 218830
| || |||| || |||||||| ||| | ||||| ||||||||||||||| |
Sbjct 1120317 TCAATCTGCTCTATCCGGGTGGTCAGTTCGGTACGCGTCTGACGGGTGGAAAGGATAGCG 1120258
Query 218831 CTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAATCAGG 218890
| | | ||||| ||||| || | |||||| | ||||||| | ||| | | |
Sbjct 1120257 CCAGTCCTAGGTACATCTTCACCATGTTGTCCGCACTGACGCGTAGTATTTTCCACCCGC 1120198
Query 218891 CCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCG-ATTGAGCCCGAGTGG 218949
|||||| ||| || |||| | ||||||| || || || || || | |||
Sbjct 1120197 TGGATGATCCGCTGCTGGAGTACCAGCTGGACGAT-AATCAGCGTATCGAACCGGTCTGG 1120139
Query 218950 TATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGGGT 219007
||| | || |||||| | ||||| || || || || |||| ||||| || ||||
Sbjct 1120138 TATTTACCGATCATTCCGATGTTGCTGGTCAACGGGGCTGATGGAATCGGTACGGGGT 1120081
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 2641938 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2641997
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 2641998 CCCACGTTGGGC 2642009
>seq112
Length=21277816
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 4125382 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4125441
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 4125442 CCCACGTTGGGC 4125453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027827871310198
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |