Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq35 93.3 9e-14 seq657 91.5 3e-13 seq646 91.5 3e-13 seq556 91.5 3e-13 seq24 91.5 3e-13 seq1 91.5 3e-13 seq668 89.7 1e-12 seq112 89.7 1e-12 >seq35 Length=5844712 Score = 93.3 bits (102), Expect = 9e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559 || ||||||| |||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 2839522 GACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 2839463 Query 142560 GAGCCCCACATCGGGC 142575 ||||||||| | |||| Sbjct 2839462 GAGCCCCACGTTGGGC 2839447 Score = 93.3 bits (102), Expect = 9e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559 || ||||||| |||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 2841532 GACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 2841591 Query 142560 GAGCCCCACATCGGGC 142575 ||||||||| | |||| Sbjct 2841592 GAGCCCCACGTTGGGC 2841607 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 2875706 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2875765 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 2875766 CCCACGTTGGGC 2875777 >seq657 Length=9220809 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 8533407 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 8533466 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 8533467 CCCCACGTTGGGC 8533479 >seq646 Length=9740529 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 3610979 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 3611038 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 3611039 CCCCACGTTGGGC 3611051 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 6124427 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 6124486 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 6124487 CCCCACGTTGGGC 6124499 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 6120435 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 6120376 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 6120375 CCCACGTTGGGC 6120364 >seq556 Length=10313149 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 10050215 ATCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 10050156 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 10050155 AGCCCCACGTTGGGC 10050141 >seq24 Length=5879236 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1863266 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1863325 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 1863326 CCCCACGTTGGGC 1863338 >seq1 Length=31626230 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 5997350 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5997291 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 5997290 CCCCACGTTGGGC 5997278 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 23466493 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 23466552 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 23466553 CCCACGTTGGGC 23466564 >seq668 Length=6225679 Score = 89.7 bits (98), Expect = 1e-12 Identities = 238/358 (66%), Gaps = 8/358 (2%) Strand=Plus/Minus Query 218654 TTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGC 218713 ||||||| || ||||| | || | || | || | || | ||||||||||||||| | Sbjct 1120434 TTAAGGTAGCCCAGTTGGCCGGATCGGTTGCAGAGAAGTCGGCCTACCATCACGGTGAAC 1120375 Query 218714 AGAGTCTGCAGGGTGCCATTGTAGGCA---TGGCACAGGACTATGTGGGCAGTAACAACA 218770 || || || || | | | | || |||| ||| ||||||| || || || |||| Sbjct 1120374 AG--TC-GCTCTGTTCGACGATCGTCAATTTGGCCCAGAACTATGTCGGAAGCAATAACA 1120318 Query 218771 TGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTG 218830 | || |||| || |||||||| ||| | ||||| ||||||||||||||| | Sbjct 1120317 TCAATCTGCTCTATCCGGGTGGTCAGTTCGGTACGCGTCTGACGGGTGGAAAGGATAGCG 1120258 Query 218831 CTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAATCAGG 218890 | | | ||||| ||||| || | |||||| | ||||||| | ||| | | | Sbjct 1120257 CCAGTCCTAGGTACATCTTCACCATGTTGTCCGCACTGACGCGTAGTATTTTCCACCCGC 1120198 Query 218891 CCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCG-ATTGAGCCCGAGTGG 218949 |||||| ||| || |||| | ||||||| || || || || || | ||| Sbjct 1120197 TGGATGATCCGCTGCTGGAGTACCAGCTGGACGAT-AATCAGCGTATCGAACCGGTCTGG 1120139 Query 218950 TATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGGGT 219007 ||| | || |||||| | ||||| || || || || |||| ||||| || |||| Sbjct 1120138 TATTTACCGATCATTCCGATGTTGCTGGTCAACGGGGCTGATGGAATCGGTACGGGGT 1120081 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 2641938 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2641997 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 2641998 CCCACGTTGGGC 2642009 >seq112 Length=21277816 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 4125382 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4125441 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 4125442 CCCACGTTGGGC 4125453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027827871310198