Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq646 122 7e-23 seq1 100 2e-16 >seq646 Length=9740529 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| ||||| |||| || || | ||| | |||||||| || ||||||||||| || Sbjct 9473346 TACCACCACGGAGTCGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCG 9473287 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 || ||| ||| ||| || || || || || ||| ||||||||||||| || ||||| | Sbjct 9473286 ACAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGG 9473227 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 | || ||||| || || |||||| || | | ||| | ||||| | | |||| Sbjct 9473226 GGATTCCTTCCTTATCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGA 9473167 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 | || | || | || |||||||| || ||||| || |||||||||||| Sbjct 9473166 CCTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATG 9473117 >seq1 Length=31626230 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || || || || || |||||||| ||| Sbjct 27268430 ATACCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCG 27268371 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| || |||||| || || ||||| ||| |||| |||||||| || || ||| Sbjct 27268370 GACAGAGTGCGTCCATCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGA 27268311 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | ||||| | | ||| Sbjct 27268310 GGAATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCG 27268251 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || ||||| ||||| || || || || |||||||| Sbjct 27268250 ACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268201 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| || ||| || ||||| || || ||||| Sbjct 27268625 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCTTCCAGCTGCTTACCG 27268566 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| |||||||| || || ||||||||||| || ||||| ||||| || Sbjct 27268565 GCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTC 27268506 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||| | | ||||| |||| || | || ||||| ||||| || Sbjct 27268505 ACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTC 27268446 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 27268445 TTCACGAAGATCTGCAT 27268429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420130928376936