Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq113 221 2e-52 seq112 197 3e-45 >seq113 Length=1764599 Score = 221 bits (244), Expect = 2e-52 Identities = 892/1391 (64%), Gaps = 48/1391 (3%) Strand=Plus/Minus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 |||||||||||| ||||| ||||| ||||| || || | ||| | ||| || ||| Sbjct 1503958 GTTCACCACCTGGAACTCGCCCGATAGCACACGTCGATTGTAAACGTTCGACGTGTACGG 1503899 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| ||| ||||||||| || |||||||| || |||||||| || | || Sbjct 1503898 CTCGAAAGACTCATTGTTGCCCAAAATTTGCGCCGTCGAAGCGGTCGGCATCGGGGCCAA 1503839 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269 ||| || || | | ||||||| | ||| | | ||||| ||||| ||| Sbjct 1503838 CAGTAGCGAATTACGAATGCCGTGCTTTGCGATCTTCTCTTTCAGCTCAGCCCAGTTCCA 1503779 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 | ||| | |||| || |||||| || | |||| | || ||||| Sbjct 1503778 AAGATCCGTCGGTTCCTTC---TT------CCACATCTCGTATTGCAAAATGCCTTTGCT 1503728 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC 244389 || || || || | || ||| ||| ||||| || || |||| || ||||| | Sbjct 1503727 CACCGGACTTCCTGCATATGTCTCGTACGGACCTTCCCGTGCTGCCAACTCGCAGCTAGC 1503668 Query 244390 GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTG-TTCATGTCGCGGGCCTTGC 244448 || || || | ||||| |||| || || || | ||| |||| | | |||| Sbjct 1503667 TTCCAGCGCCCCATAGTAAATGGATTCAAATATT-TGTTGATTCAGCTTTTGTGCCTCTT 1503609 Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508 ||| | | || || ||||| ||||| | ||||||| |||||||| ||||| | Sbjct 1503608 CGCTTTCGTATGGATAGCGCATCAAAATGAATGCATCGGCCATGCCCTGCACACCGATAC 1503549 Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 ||||||| || || ||| | ||||||||| | ||||| || || || || ||||| || Sbjct 1503548 CGATGGGCCTATGGCGCATATTGGAGCGCTTTGCTTCCGGTACCGGATAGTAGTTGATGT 1503489 Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628 |||| | ||||| || ||||| || | || | |||| || |||| | ||||| Sbjct 1503488 CGATGATTTTGTTCAGATTGCGCGTAACGATCTTGGCGACATCCTTCAGCTTCGCAAAGT 1503429 Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTC-ACAAACTCGTTGAGGGCGACGCTG 244687 |||| |||| || | ||| || ||| ||| || || | | Sbjct 1503428 CGTATG--------TCCT--------GTCAGCCTTTACGAACATGTTCAGTGCAATCGAG 1503385 Query 244688 GCCAGGTTGCAGACGGCCACCTCCTC---CGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744 ||||| ||||| || || | ||| || ||| | |||| ||||| |||||||| Sbjct 1503384 GCCAGATTGCAAACCGCAATCTCATCTTTCGAC---GAATACTCCACAATTTCGGTGCAC 1503328 Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 | ||| |||||| ||||| || | || ||| || ||| || ||||| || ||| Sbjct 1503327 AAGTTGGAGCACTTAATGGTTCCAACGTTCTGTTGGTTGCTTTTACGATTGCATGCATCC 1503268 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAG 244863 ||||| ||||| | || | || || || | ||| | | | || ||| | ||| | Sbjct 1503267 TTGTACAGCATATACGGTACGCCCGTTTCCACCTGCGATTCAATGATCGC-GAACCACAA 1503209 Query 244864 GTCCCTAGCCTTGACC-GTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGG 244922 || ||||| ||| ||| | | | |||||| ||||| | ||||||||| | Sbjct 1503208 ATCTTGCGCCTTCACCTGTCGAATAAAGCGT-CCCTCTTTTTCGTAACCGGTGTACAGCG 1503150 Query 244923 CCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGAC 244982 ||||||||| |||||| || | | ||||| || || ||||| || | Sbjct 1503149 TCTCGAACTCTTCGCCCCAAGTTTCTGCCAATCCGGGACAATCGTGAGGACACATCAGGC 1503090 Query 244983 TCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGA 245042 ||||| || ||| |||| || |||||| ||||| || ||||| || || | || Sbjct 1503089 TCCACATTTCGTTCGCCTCTACCCGCTTCATGAACAGGTCCGGTATCCACAGTGCGTAGA 1503030 Query 245043 AGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAA 245102 | | ||| | | | | ||| ||| ||| ||||||||| | || |||| ||| || | Sbjct 1503029 ACATGTCGCGTGCACGCACCTCCTCCTTGCCGGTGTTCTTCTTTAGATCCAGAAACTCGA 1502970 Query 245103 AGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTC 245162 | || ||| ||||||| || || | ||| | || | || || ||||| |||||||| | Sbjct 1502969 ATACATCGCCGTGCCATGGTTCGAGGTATATGGCAAAAGCTCCCGGCCGTTTGTTGCCAC 1502910 Query 245163 CCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCG 245218 ||||||||| ||| | ||||| |||| | | |||||| | || || | ||| Sbjct 1502909 CCTGGTCCA-CATAC---CGAGCCGTATTGTTGTACACGCGCAGCATTGGTACCAATCCG 1502854 Query 245219 TTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC 245278 || || ||||| || || |||||| | ||||| | | | | | | | Sbjct 1502853 TTCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCACGAATACAGTGCACGTTC 1502794 Query 245279 ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATG 245338 | || | |||||| || || || || || ||||| ||| | ||||| || Sbjct 1502793 AGCCCAATTCCGCCAGCAGATTTTGAAATCAGCGCGCACTGCTTCAGCGTGTCGTAGATA 1502734 Query 245339 CCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTG-GGGCTTGGG 245397 || || || ||||| |||| | |||||||| ||||| |||| ||| |||| | Sbjct 1502733 CCTTCAATACTGTCGTCAGACATGGTTAGCAGAAAACAGGATGACAACTGCGGGCGCTGC 1502674 Query 245398 GCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCC 245457 | ||| || ||||| || || ||| |||||||||||||| ||| || || Sbjct 1502673 GTTGC-CGCTGCGAACATGGTAGGTGAGGCATGGGTAAAGTAGCGCTCCGACAGCAAATT 1502615 Query 245458 GTACGTCTGGA 245468 ||| |||| || Sbjct 1502614 GTATGTCTCGA 1502604 >seq112 Length=21277816 Score = 197 bits (218), Expect = 3e-45 Identities = 294/414 (71%), Gaps = 5/414 (1%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 || ||||| ||||| || ||| |||| ||| | ||||||||||| |||||||| || ||| Sbjct 19493552 CTATTCAATGCCATTGAAACGTTGCCGTGCGTGAAGAAGAAGGCAGACTGGGCACTGAAC 19493493 Query 42669 TGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAG 42728 |||||| ||| | |||| || ||||| | | ||||| ||| | || ||||| Sbjct 19493492 TGGATCTCGAGCAAGAAGGCAAACTTTGGCGAACGTGTCGTAGCGTTTGCGGCTGTCGAA 19493433 Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGAT 42787 || ||||||||| || ||| ||| |||| |||||||| ||| || ||| | || Sbjct 19493432 GGAATCTTCTTCAGCGGTAGCTTTGCCGCCATTTTCTGGCTAAAGAAGCGAGGCCTT-AT 19493374 Query 42788 GCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTT 42847 ||| ||||| |||||||||||||| || || | ||||| || ||||| | ||||| Sbjct 19493373 GCCGGGACTGACCTTCTCGAACGAGCTGATTTCACGCGACGAAGGACTGCACTGTGACTT 19493314 Query 42848 TGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGC 42907 ||||||||| ||||| | | || ||| || || || ||||||||||| || Sbjct 19493313 TGCCTGCCTGATGTTC---AAGTATCTGGTGCAGAAACCTTCCAAGGAGCGGGTGACGGA 19493257 Query 42908 CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTC 42967 ||||||| || || || | ||||||| | || || | ||| || | ||||| || Sbjct 19493256 CATCATCCGTGATGCGGTTGTGATCGAGCAAGAATTTTTGACGAAGGCCCTGCCGGTCGA 19493197 Query 42968 CCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGA 43021 || |||| |||||| ||| || |||| ||||||| ||| ||| ||||| Sbjct 19493196 TATGCTCGGTATGAACTGCGAACTGATGTCGCAGTACATTGAGTTCGTGGCCGA 19493143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944331196725280