Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq179 132 4e-26
>seq179
Length=1335352
Score = 132 bits (146), Expect = 4e-26
Identities = 238/345 (69%), Gaps = 2/345 (1%)
Strand=Plus/Minus
Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296
|| ||||| ||||| || | ||||| || | | || |||||||||||||||||||||
Sbjct 1075979 AGTCCAGTGACATGTGCGATCATATGGGTCAGCAAAGAGTAGCTGGCAATGTTAAAAGGA 1075920
Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356
|| ||||| || | || |||||| |||||||| ||| || || || || || ||| |
Sbjct 1075919 ACGCCCAACCCAACATCGGCCGACCGCTGATACATCTGGCAAGACAGTTCTCCATCACCA 1075860
Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416
||| |||| || || ||||||| |||||||| ||||| | | || | ||
Sbjct 1075859 ACAAAAAACTGTGCCAAACAGTGACAAGGCGGAAGGGCCATGTTGGGTATATCGGAAGGA 1075800
Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476
||||| || | ||| || |||| | ||| || ||||| || |||||| | | |
Sbjct 1075799 TTCCAAGCGCTCATGATAATTCGACGATCATGTGGATTGTTCTTTATTTTGTGGATCACA 1075740
Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGT-CCACGTACGCCGC 20535
| | || ||| |||| ||||| |||| ||| || | | || | ||| | ||
Sbjct 1075739 TCTGCCAGTTGATCAATTCCCTGTCCTGCATAATCGTCGT-GGCATGTTTTGTATGTTGC 1075681
Query 20536 CCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580
|||||||| | |||||| || |||||||| || || || || ||
Sbjct 1075680 ACCAAAGTGGCGCCACTGAAAGCCGTAAACTGGACCTAAGTCACC 1075636
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441369059365520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |