Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq179 132 4e-26 >seq179 Length=1335352 Score = 132 bits (146), Expect = 4e-26 Identities = 238/345 (69%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || ||||| ||||| || | ||||| || | | || ||||||||||||||||||||| Sbjct 1075979 AGTCCAGTGACATGTGCGATCATATGGGTCAGCAAAGAGTAGCTGGCAATGTTAAAAGGA 1075920 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || ||||| || | || |||||| |||||||| ||| || || || || || ||| | Sbjct 1075919 ACGCCCAACCCAACATCGGCCGACCGCTGATACATCTGGCAAGACAGTTCTCCATCACCA 1075860 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 ||| |||| || || ||||||| |||||||| ||||| | | || | || Sbjct 1075859 ACAAAAAACTGTGCCAAACAGTGACAAGGCGGAAGGGCCATGTTGGGTATATCGGAAGGA 1075800 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 ||||| || | ||| || |||| | ||| || ||||| || |||||| | | | Sbjct 1075799 TTCCAAGCGCTCATGATAATTCGACGATCATGTGGATTGTTCTTTATTTTGTGGATCACA 1075740 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGT-CCACGTACGCCGC 20535 | | || ||| |||| ||||| |||| ||| || | | || | ||| | || Sbjct 1075739 TCTGCCAGTTGATCAATTCCCTGTCCTGCATAATCGTCGT-GGCATGTTTTGTATGTTGC 1075681 Query 20536 CCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 |||||||| | |||||| || |||||||| || || || || || Sbjct 1075680 ACCAAAGTGGCGCCACTGAAAGCCGTAAACTGGACCTAAGTCACC 1075636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441369059365520