Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq112 113 4e-20 seq646 104 2e-17 >seq112 Length=21277816 Score = 113 bits (124), Expect = 4e-20 Identities = 219/317 (69%), Gaps = 6/317 (2%) Strand=Plus/Plus Query 37815 GAAAACGCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAG 37874 |||| ||| | |||||||| |||||||| |||| || | ||| | |||| ||| Sbjct 19215517 GAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGCAGGAG 19215576 Query 37875 GGTAAGATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGAT 37934 || || ||||| | | |||| ||||| ||| |||||| || |||| ||| | | Sbjct 19215577 GGCAAAATGCACGGCTTTCTGCGGATGTACTGGGCCAAGAAGATACTGGAGTGGACAAAA 19215636 Query 37935 GATGCTCAGACC--GCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACG 37992 | | | ||| |||||| | || || ||||| || ||| ||||||| |||| | Sbjct 19215637 -ACACCC-GACGAAGCGCTCGAGATAGCGATCTATCTGAACGATCGGTACAGCCTGGATG 19215694 Query 37993 GGCGTGATCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATAGA 38051 |||| ||||| ||||| |||||||| || ||||||| || |||||| |||||||| Sbjct 19215695 GGCGCGATCCGAACGGGTACGTCGGGTGCATGTGGTCGATC-GCGGGCATACACGATCAG 19215753 Query 38052 GCCTGGCGCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTACAACGGATGTGTT 38111 | ||| ||| |||| |||||| || ||||||||||||| | ||||| Sbjct 19215754 GGATGGAAGGAGCGCGAAATTTTCGGCAAAATCAGGTACATGAACTATGAGGGATGCAAG 19215813 Query 38112 AGGAAGTTTAATGTTAA 38128 | |||||||| || || Sbjct 19215814 CGTAAGTTTAACGTCAA 19215830 >seq646 Length=9740529 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| || |||||||||||||| || |||||||||||||||||| || | | Sbjct 6802126 CCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 6802067 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | | || |||| |||| ||||| |||||||| ||||| |||||||||||| ||| Sbjct 6802066 AGTGTGCGACCGTCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGG 6802007 Query 34021 ACGCTCTCTTTGTCC 34035 | || ||| || ||| Sbjct 6802006 ATGCCCTCCTTATCC 6801992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397059119023756