Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq24 116 4e-21
seq668 111 2e-19
seq112 100 3e-16
>seq24
Length=5879236
Score = 116 bits (128), Expect = 4e-21
Identities = 277/411 (67%), Gaps = 6/411 (1%)
Strand=Plus/Minus
Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585
|| |||||||| | |||||| ||| || || || || | || || || ||| ||
Sbjct 3063585 TACCAAGCATCCACGTCGGAGCTGTACGGAAAGGTGGCCGAGACACCGCAGAACGAGAAG 3063526
Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGC-GTCTCAAAGGTTGCGGCACATTGGCTCGT 8644
||||| ||||||||||| ||| || | | || ||| | ||| | ||| | ||
Sbjct 3063525 ACACCGTTCTATCCACGCTCCCCGTACGCCTGTGCCAAGATGTACGG-TTACTGGATTGT 3063467
Query 8645 GAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGA 8704
|| || || || ||| | || | | | || || ||| || |||||||| || |||||
Sbjct 3063466 GATAAACTATCGCGAAGCGTACGATATGTTCGCCTGCAATGGGATTCTCTTTAATCACGA 3063407
Query 8705 GTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCA-CCGAT-GGTATCAAACAA 8762
|||||| || || || |||| || ||| || || | ||| | ||| | || |
Sbjct 3063406 GTCACCGCGCCGGGGAGAAAATTTTGTCACACGCAAAATAACCCGCTCGGTGGCGAAGAT 3063347
Query 8763 ATCGTCGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGG 8822
|||| | | || || ||||| | | || |||| || || | || || | ||||||
Sbjct 3063346 ATCG-CTC-GGACAGCAGGAGTACCTCGAGCTGGGTAATCTTGATTCCAAGCGTGACTGG 3063289
Query 8823 GGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGAC 8882
|| |||||||| ||||| || ||||| ||||||||| | | || || || || | ||
Sbjct 3063288 GGCCACGCCAAAGACTACGTCGAAGCGATGTGGCTCATGATGCAGCAGGACAAGCCAGAA 3063229
Query 8883 GAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 8933
|| | || | || || ||||| || |||||||| ||||||| || |||
Sbjct 3063228 GATTTCGTTATTGCCACCGGGGAAACGCACTCCGTGCGGGAGTTTGTAGAG 3063178
>seq668
Length=6225679
Score = 111 bits (122), Expect = 2e-19
Identities = 150/206 (73%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 171881 GTGAAGATGTACCTCGTTTGA--GACGC-ATCTTTGCCACCCATGAGACGCGTCCCAAAT 171937
|||||||||||||| | || | ||| ||| || |||||| | |||||||| || ||
Sbjct 1120236 GTGAAGATGTACCTAG---GACTGGCGCTATCCTTTCCACCCGTCAGACGCGTACCGAAC 1120292
Query 171938 TGACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTG 171997
||||||| ||| | || |||||||| || || || | |||| | |||||| |||
Sbjct 1120293 TGACCACCCGGATAGAGCAGATTGATGTTATTGCTTCCGACATAGTTCTGGGCCAAATTG 1120352
Query 171998 ACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGCGACATAC 172057
|| ||||| ||| || |||||||||||||||||||||||| || || || |
Sbjct 1120353 ACGATCGTCGAACAGAGCGACTGTTCACCGTGATGGTAGGCCGACTTCTCTGCAACCGAT 1120412
Query 172058 GCCGCCAACTGTGCCACCTTCATCTC 172083
| |||||||| || ||||| | |||
Sbjct 1120413 CCGGCCAACTGGGCTACCTTAACCTC 1120438
>seq112
Length=21277816
Score = 100 bits (110), Expect = 3e-16
Identities = 118/160 (74%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||| || || ||||| || || || || || ||||||||| ||||||
Sbjct 19493310 GGCAAAGTCACAGTGCAGTCCTTCGTCGCGTGAAATCAGCTCGTTCGAGAAGGTCAGTCC 19493369
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||| || || |||||||| | ||||||||| || ||| ||| |||||||||
Sbjct 19493370 CGGCATAAGGCCTCGCTTCTTTAGCCAGAAAATGGCGGCAAAGCTACCGCTGAAGAAGAT 19493429
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAG 126205
||| || ||| ||| ||||| | || ||| || |||||
Sbjct 19493430 TCCTTCGACAGCCGCAAACGCTACGACACGTTCGCCAAAG 19493469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597348537428240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |