Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq113 120 3e-22
seq646 118 1e-21
seq1 104 2e-17
>seq113
Length=1764599
Score = 120 bits (132), Expect = 3e-22
Identities = 235/346 (68%), Gaps = 1/346 (0%)
Strand=Plus/Minus
Query 154071 GTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATA 154130
||| |||||||||| || || |||||||| || ||||| || || | || || |||||
Sbjct 1503906 GTGTACGGCTCGAAAGACTCATTGTTGCCCAAAATTTGCGCCGTCGAAGCGGTCGGCATC 1503847
Query 154131 TACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCC 154190
|||| || | || || || | ||||| ||||| || | ||| | || |||
Sbjct 1503846 GGGGCCAACAGTAGCGAATTACGAATGCCGTGCTTTGCGATCTTCTCTTTCAGCTCAGCC 1503787
Query 154191 CAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTC 154250
|| ||||| | | || |||| | |||||||| ||||||||||||| || |||
Sbjct 1503786 CAGTTCCAAAGATCCGTCGGTTCCTTCTTCCACATCTCGTATTGCAAAATGCCTTTGCTC 1503727
Query 154251 GCCGGACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCT 154310
||||||| | ||| | |||||| || | | || |||||| ||||| || |||
Sbjct 1503726 ACCGGACTTCCTGCATATGTCTCGTACGGACCTTCCCGTGCTGCCAACTCGCAGCTAGCT 1503667
Query 154311 TCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCA 154370
|| | |||| ||||||| | || ||| ||||||| || | | ||| || | ||
Sbjct 1503666 TCCAGCGCCCCATAGTAAATGGATTCAAATATTTGTTGATTCAGCTTTTGTGCCTCTTCG 1503607
Query 154371 CTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGA-GCCCT 154415
|||||||| || | | || | | || |||||||| | |||||
Sbjct 1503606 CTTTCGTATGGATAGCGCATCAAAATGAATGCATCGGCCATGCCCT 1503561
>seq646
Length=9740529
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || ||||| ||||| | || ||||| || ||||||||||| || |
Sbjct 9473345 ACCACCACGGAGTCGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGA 9473286
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| | || || |||||||||||||| | ||||| |||||||| || || ||
Sbjct 9473285 CAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGG 9473226
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|||||||| || || || || ||| ||| ||| || | || || | || ||
Sbjct 9473225 GATTCCTTCCTTATCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGAC 9473166
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||||||| | ||||| |||||||| |||||
Sbjct 9473165 CTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 9473118
Score = 113 bits (124), Expect = 5e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||||| | |||||| ||||||| ||||| || || ||||||||||| || |
Sbjct 6802126 CCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 6802067
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||| |||| || |||||||| |||||| | || || |||||||| || || ||
Sbjct 6802066 AGTGTGCGACCGTCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGG 6802007
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || || || || || || || ||| ||| ||| | ||||| || || ||
Sbjct 6802006 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 6801947
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | ||| || || || | ||||| ||||| || ||||| ||
Sbjct 6801946 TCAAGGGTAATGGTTTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 6801897
>seq1
Length=31626230
Score = 104 bits (114), Expect = 2e-17
Identities = 162/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || |||| | ||| || ||||||| |||||||| || |||||||| ||||| |
Sbjct 15287664 CCACCACGCAGACGAAGGACCAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCCGAC 15287605
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||| | || || ||||||||||| || | || || |||||||| || || ||
Sbjct 15287604 AGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGG 15287545
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
||||| || || || || || || ||| || ||| | ||||| | |||||
Sbjct 15287544 ATTCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTCTCGATGGTATCGGAAGGCTCCACC 15287485
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAA 64448
|| | || | ||||| || |||| || || ||||| || ||||| ||||
Sbjct 15287484 TCAAGGGTGATCGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCATGTTAA 15287433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499640565510320
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