Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq113 122 9e-23 >seq113 Length=1764599 Score = 122 bits (134), Expect = 9e-23 Identities = 1041/1669 (62%), Gaps = 61/1669 (4%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | || || | |||||||||| |||| || || || | ||||| |||| | Sbjct 1502471 TACAACTATTTCGGCTTCAAAACTTTGGAACGATCCTATCTGTTGAAGATCCGGGGCAAG 1502530 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 | || |||||||| || || |||||||||| || ||||| ||||| || | || Sbjct 1502531 ATCGTTGAACGACCGCAGCACATGTTGATGCGCGTTGCGATCGGTATTCATGGTGAAGAT 1502590 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACA-----TGCGGGACAAGAGGTA---TACCA 93889 || ||| ||| | | | ||| | | ||| | || | || |||| Sbjct 1502591 AT--CGA------TGCAGCCATCGAGACATACAATTTGCTGTCGGAGCGCTACTTTACCC 1502642 Query 93890 TGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCC 93949 ||| | || ||| ||||| |||| || | | || ||| |||| || ||||| | Sbjct 1502643 ATGCCTCACCTACCATGTTCGCAGCGGCAACGCAGCGCCCGCAGTTGTCATCCTGTTTTC 1502702 Query 93950 TGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGA 94009 || | || | | |||| || || || | ||||| || ||| | || ||| Sbjct 1502703 TGCTAACCATGTCTGACGACAGTATTGAAGGTATCTACGACACGCTGAAGCAGTGCGCGC 1502762 Query 94010 CCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069 || ||||||| || || ||||| ||| | | || ||| | ||||| | ||| Sbjct 1502763 TGATTTCAAAATCTGCTGGCGGAATTGGGCTGAACGTGCACTGTATTCGTGCGAAGGGAA 1502822 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 | |||||| |||||| || || | || ||||| | || || ||||| || || | || Sbjct 1502823 CGTACATCTCCGGTACGAACGGGATTTCGAACGGATTGGTACCAATGCTGCGCGTGTACA 1502882 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 |||| |||| || || |||||||||||||| | || ||| |||| || | | Sbjct 1502883 ACAATACGGCTCGGTATGTGGACCAGGGTGGCAACAAACGGCCGGGAGCTTTTGCCATAT 1502942 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 | ||||| || ||||||| || || | || | || || |||||| ||||| Sbjct 1502943 ACCTCGAACCATGGCACGGCGATGTATTCGAGTTTCTGGATCTAAAGAAGAACACCGGCA 1503002 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 | || || | | || | ||| | |||||||| || ||| | || ||||| || |||| Sbjct 1503003 AGGAGGAGGTGCGTGCACGCGACATGTTCTACGCACTGTGGATACCGGACCTGTTCATGA 1503062 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 | || || ||| ||| ||||| || | ||||| | || ||||||||| || Sbjct 1503063 AGCGGGTAGAGGCGAACGAAATGTGGAGCCTGATGTGTCCTCACGATTGTCCCGGATTGG 1503122 Query 94370 CCGACGTTTGTGGATCG-CGTTTTGAAGAC-TTGTATGCTCGTTACGAATCGCAGGGCAA 94427 | || ||| || || | || |||| |||| | |||||||| |||| | Sbjct 1503123 CAGAAACTTGGGG--CGAAGAGTTCGAGACGCTGTACACCGGTTACGAAAAAGAGGG--A 1503178 Query 94428 GGC-----CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAG 94482 || | |||| | || || || | ||||| |||| | || ||| Sbjct 1503179 CGCTTTATTCGACAGGTGAAGG-CGCAAG--ATTTGTGGTTCGCGATCATTGAATCGCAG 1503235 Query 94483 GTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAG 94542 ||||| ||||| || || || ||| |||||| | ||| || |||||| Sbjct 1503236 GTGGAAACGGGCGTACCGTATATGCTGTACAAGGATGCATGCAATCGTAAAAGCAACCAA 1503295 Query 94543 CAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCT 94602 ||| || | || || ||| |||| || |||||||||| ||||| |||||| | || Sbjct 1503296 CAGAACGTTGGAACCATTAAGTGCTCCAACTTGTGCACCGAAATTGTGGAGTATTCGTCG 1503355 Query 94603 CCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGAT 94662 || |||||||| || || || |||| ||| || ||| || ||||| | | Sbjct 1503356 AAAGATGAGATTGCGGTTTGCAATCTGGCCTCGATTGCACTGAACATGTTCGT---AAAG 1503412 Query 94663 GCCTACACGTC-TACTGCTTCGTTCG-ATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGA 94720 || ||| | | ||| ||| | || | ||| |||| || |||| | || Sbjct 1503413 GCTGACAGGACATACGACTT--TGCGAAGCTGAAGGA---TG------TCGC---CAAGA 1503458 Query 94721 TGGTCTTG---AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGG 94777 | || | || ||||||| | ||||||| |||| ||| || || ||||| || Sbjct 1503459 TCGTTACGCGCAATCTGAACAAAATCATCGACATCAACTACTATCCGGTACCGGAAGCAA 1503518 Query 94778 AGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGC 94837 || ||| || || ||| |||||||||| ||||| || ||||| | || || || Sbjct 1503519 AGCGCTCCAATATGCGCCATAGGCCCATCGGTATCGGTGTGCAGGGCATGGCCGATGCAT 1503578 Query 94838 TGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATAT 94897 | | ||||||| || ||||| | || || ||||| | |||| Sbjct 1503579 TCATTTTGATGCGCTATCCATACGAAAGCGAAGAGGCACAAAAGCTGAATCAACAAATAT 1503638 Query 94898 TCGAAAGCATTTATTACGGGGC-CATGAAACAATCCGTCCACTTGGCCAGATCGGACGGC 94956 | ||| |||||| || ||||| | ||| | | | | | | |||| ||| ||| | Sbjct 1503639 TTGAATCCATTTACTATGGGGCGCTGGAAGCTAGCTG-CGAGTTGG-CAGCACGG--GAA 1503694 Query 94957 GGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTC 95016 || || |||| | | ||| || || | |||||||| || | ||| | Sbjct 1503695 GGTCCGTACGAGACATATGCAGGAAGTCCGGTGAGCAAAGGCATTTTGCAATACGAGATG 1503754 Query 95017 TGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGG--AAGCTCTACGCGCTGATGTTATCA 95074 ||| | | || ||| ||| | |||||| |||| | | | ||| | | Sbjct 1503755 TGGAAGAAGGAACCGACGGATCTTTGGAACTGGGCTGAGCTGAAAGAGAAGATCGCA--A 1503812 Query 95075 AACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGA 95134 | ||||| | || |||| || ||||||| ||||| || || || |||||||| | Sbjct 1503813 AGCACGGCATTCGTAATTCGCTACTGTTGGCCCCGATGCCGACCGCTTCGACGGCGCAAA 1503872 Query 95135 TCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGC 95194 | | |||||||| ||||| ||||| || | ||| || ||||| ||||| | || |||| Sbjct 1503873 TTTTGGGCAACAATGAGTCTTTCGAGCCGTACACGTCGAACGTTTACAATCGACGTGTGC 1503932 Query 95195 TCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTG 95254 | | || || |||| || | ||| | || || || | || ||||| | |||| Sbjct 1503933 TATCGGGCGAGTTCCAGGTGGTGAACCATCATCTACTGCAAGATCTGACTGCGATGGGCC 1503992 Query 95255 TGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCC 95314 | |||| | | | | |||||| | | | || || ||| | |||||||| Sbjct 1503993 TATGGGATCTCGATATGAAGAACAACATTTTGTCTAATAATGGTTCCATTCAGAACATTG 1504052 Query 95315 CGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363 || ||| |||| ||| | |||||||| || ||||||||||| Sbjct 1504053 AATCGATTCCGCAGGAGATCCGCGACCTCTACAAAACGGTGTGGGAGAT 1504101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719007220880