Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=31626230 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 |||||||| || ||||||| ||||| |||||| ||||| ||| | ||||||||| Sbjct 22676911 GCCGGGTTTGGGGTGACGGGTGGCGTACATCGGCTGTGGTGTCACCGTTCGTACAAGGCC 22676852 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| | | | ||||| | |||| |||| | || || |||||||| ||| Sbjct 22676851 AAACTACCGCTGCGCATCATCCTGATGTGCTGCTACTCGATCGCCGGCCAGAACACGATC 22676792 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACG-ACGGCCGACCC 108518 | ||||| | ||||| | | || ||||||||||| || ||| |||| || || Sbjct 22676791 TACGACTGGGTCCGGGATCATCGCATCCATCACAAGTACTCGGAAACGGACGGT-GATCC 22676733 Query 108519 ACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATG 108567 ||||||||| ||| |||| ||| || | ||||||| || ||||| ||| Sbjct 22676732 ACACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATG 22676684 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 || |||||||| || |||| ||| | ||||||| | ||||| |||| ||| |||||||| Sbjct 22670809 GCAGGGTTCGGCGTAACGGGCGGTGCCCATCGGCTCTGGACGCACAGAGCGTACAAGGCG 22670750 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||||| | | ||||| | |||| || || | || ||||||| | Sbjct 22670749 AAGCTGCCGTTGCGCATCATCCTGATGTGCTGCTACTGTCTGTCCGGCCAGAACAGTCTG 22670690 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519 | ||||||| || || | | || ||||||||||| || ||| ||||| || Sbjct 22670689 TTCGATTGGGTGCGGGACCATCGCATCCATCACAAGTACTCGGAAACGGATGCCGATCCG 22670630 Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGAT 108569 |||||| | ||| | || || | | | | |||||||| ||||| |||| Sbjct 22670629 CACAACTCGAACCGTGGCTTTTTCTACGCACACGTGGGTTGGCTGCTGAT 22670580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381769645363632