Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 2e-17
>seq1
Length=31626230
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399
|||||||| || ||||||| ||||| |||||| ||||| ||| | |||||||||
Sbjct 22676911 GCCGGGTTTGGGGTGACGGGTGGCGTACATCGGCTGTGGTGTCACCGTTCGTACAAGGCC 22676852
Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459
| ||| | | | ||||| | |||| |||| | || || |||||||| |||
Sbjct 22676851 AAACTACCGCTGCGCATCATCCTGATGTGCTGCTACTCGATCGCCGGCCAGAACACGATC 22676792
Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACG-ACGGCCGACCC 108518
| ||||| | ||||| | | || ||||||||||| || ||| |||| || ||
Sbjct 22676791 TACGACTGGGTCCGGGATCATCGCATCCATCACAAGTACTCGGAAACGGACGGT-GATCC 22676733
Query 108519 ACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATG 108567
||||||||| ||| |||| ||| || | ||||||| || ||||| |||
Sbjct 22676732 ACACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATG 22676684
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399
|| |||||||| || |||| ||| | ||||||| | ||||| |||| ||| ||||||||
Sbjct 22670809 GCAGGGTTCGGCGTAACGGGCGGTGCCCATCGGCTCTGGACGCACAGAGCGTACAAGGCG 22670750
Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459
| ||||| | | ||||| | |||| || || | || ||||||| |
Sbjct 22670749 AAGCTGCCGTTGCGCATCATCCTGATGTGCTGCTACTGTCTGTCCGGCCAGAACAGTCTG 22670690
Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519
| ||||||| || || | | || ||||||||||| || ||| ||||| ||
Sbjct 22670689 TTCGATTGGGTGCGGGACCATCGCATCCATCACAAGTACTCGGAAACGGATGCCGATCCG 22670630
Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGAT 108569
|||||| | ||| | || || | | | | |||||||| ||||| ||||
Sbjct 22670629 CACAACTCGAACCGTGGCTTTTTCTACGCACACGTGGGTTGGCTGCTGAT 22670580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381769645363632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |