Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq113 358 7e-94 seq112 129 6e-25 seq1 104 2e-17 seq646 96.9 3e-15 seq146 95.1 1e-14 >seq113 Length=1764599 Score = 358 bits (396), Expect = 7e-94 Identities = 1205/1854 (65%), Gaps = 34/1854 (2%) Strand=Plus/Minus Query 152712 GCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCG-CCACGAGTAATT 152770 || ||||| ||||||||||| ||||||||||| || || || || | ||| ||| Sbjct 1504275 GCCGGCTTGGTGCGCAAATAGTACATGCCCGTCTTCAGTCC-CATCTTCCAGCCGTAGAA 1504217 Query 152771 GTGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGATTGGCT 152830 || ||||| |||| | | || |||| | |||||| | || |||||||| Sbjct 1504216 ATGGATCGACGTCAGCTTGCCATAGTTCGGCTCGGCCACGTGTATGTTGAACGATTGTGA 1504157 Query 152831 CTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAAT-CATGCGTTTTGCCTTCATCT 152889 |||||| || || || || ||||| ||||| | ||| || | |||| || |||| Sbjct 1504156 CTGATCGATAAATGCCCCGCGATCGGCAGCCATTTTAATGCACGT-TTTTACCGAAATCT 1504098 Query 152890 CCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAATGTTCTGAATAG 152949 |||| | |||||||| | | | | ||| || ||||||||||||||| | Sbjct 1504097 CCCACACCGTTTTGTAGAGGTCGCGGATCTCCTGCGGAATCGATTCAATGTTCTGAATGG 1504038 Query 152950 AGCCCTTGTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGTACACGTTCAGTTTAATGA 153009 | || || | | ||||| ||| || ||| | | | | || | | | Sbjct 1504037 AACCATTATTAGACAAAATGTTGTTCTTCATATCGAGATCCCATAGGCCCATCGCAGTCA 1503978 Query 153010 GGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAAT 153069 | || | | | | ||||| ||||| || |||||||||| | ||| |||| | Sbjct 1503977 GATCTTGCAGTAGATGATGGTTCACCACCTGGAACTCGCCCGATAGCACACGTCGATTGT 1503918 Query 153070 ATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTG 153129 | || || ||| | || || || || || || ||||| | ||||| ||||| | | Sbjct 1503917 AAACGTTCGACGTGTACGGCTCGAAAGACTCATTGTTGCCCAAAATTTGCGCCGTCGAAG 1503858 Query 153130 CGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCT 153189 |||||||||| |||| || | ||||| || | ||||||| | || | || | Sbjct 1503857 CGGTCGGCATCGGGGCCAACAGTAGCGAATTACGAATGCCGTGCTTTGCGATCTTCTCTT 1503798 Query 153190 TCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACA 153249 ||| | | ||| | ||| || ||| |||| | |||||||| ||||| || || | Sbjct 1503797 TCAGCTCAGCCCAGTTCCAAAGATCCGTCGGTTCCTTCTTCCACATCTCGTATTGCAAAA 1503738 Query 153250 CTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTT 153309 ||| || | ||||| || ||| | || ||| || || ||| |||| | Sbjct 1503737 TGCCTTTGCTCACCGGACTTCCTGCATATGTCTCGTACGGACCTTCCCGTGCTGCCAACT 1503678 Query 153310 CGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGG 153369 |||||||||| || ||||| |||||||| |||| ||| ||||||| ||| || Sbjct 1503677 CGCAGCTAGCTTCCAGCGCCCCATAGTAAATGGATTCAAATATTTGTTGATTCAGCTTTT 1503618 Query 153370 CCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGA 153429 || |||||||| ||||| || ||||| || | || || ||||||| ||||| | Sbjct 1503617 GTGCCTCTTCGCTTTCGTATGGATAGCGCATCAAAATGAATGCATCGGCCATGCCCTGCA 1503558 Query 153430 TACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGT 153489 ||||| |||||||| | ||| | ||| |||| | || || || ||||||| Sbjct 1503557 CACCGATACCGATGGGCCTATGGCGCATATTGGAGCGCTTTGCTTCCGGTACCGGATAGT 1503498 Query 153490 GATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTT 153549 ||| ||||| |||||||| || |||||| || | || | | |||| || | Sbjct 1503497 AGTTGATGTCGATGATTTTGTTCAGATTGCGCGTAACGATCTTGGCGACATCCTTCAGCT 1503438 Query 153550 TCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCA 153609 || | || || || ||| | ||| | |||| | |||| ||||| || |||| Sbjct 1503437 TCGCAAAGTCGTATGTCCT---GTCAGCCTTTACGAACATGTTCAGTGCAATCGAGGCCA 1503381 Query 153610 GATTACAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTG 153668 |||| || || || |||| || || || |||| ||| || |||| ||| | |||| Sbjct 1503380 GATTGCAAACCGCAATCTCATCTTTCGACG-AATACTCCACAATTTCGGTGCACAAGTTG 1503322 Query 153669 CTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAG 153728 ||| || ||| || | || || || |||||||| |||||||| || || ||| | Sbjct 1503321 GAGCACTTAATGGTTCCAACGTTCTGTTGGTTGCTTTTACGATTGCATGCATCCTTGTAC 1503262 Query 153729 AGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCC 153785 ||||| |||||| |||| || || || |||| ||| | ||| |||| || || Sbjct 1503261 AGCATATACGGTACGCCCGTTTCCACCTGCGATTCAATGATCGCGAACC---ACAAATCT 1503205 Query 153786 TGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCA 153845 ||||| |||| | | | |||| ||||| | ||||| | |||||| ||| Sbjct 1503204 TGCGCCTTCACCTGTCGAATAAAGCGTCCCTCTTTTTCGTAACCGGTGTACAGCGTCTCG 1503145 Query 153846 AACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCAC 153905 ||||| ||||| | || || | |||||||| | || ||||||||||| |||| Sbjct 1503144 AACTCTTCGCCCCAAGTTTCTGCCAATCCGGGACAATCGTGAGGACACATCAGGCTCCAC 1503085 Query 153906 ATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGG 153965 || |||| || | || || ||||||||| ||||| | ||| || ||||| | | | Sbjct 1503084 ATTTCGTTCGCCTCTACCCGCTTCATGAACAGGTCCGGTATCCACAGTGCGTAGAACATG 1503025 Query 153966 TCGCGCGCCTTGCA-ATCCTCCGCGCCCATGTTGCGTTTCAGATTGAG-CACGCTATAGA 154023 ||||| | | ||| |||||| ||| |||| || |||| || || | | | | Sbjct 1503024 TCGCGTG-CACGCACCTCCTCCTTGCCGGTGTTCTTCTTTAGATCCAGAAACTCGA-ATA 1502967 Query 154024 TGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACG---CTTTCCGCCCT 154080 ||| ||||||| ||||| | ||| | ||| | || || || || || |||| Sbjct 1502966 CATCGCCGTGCCATGGTTCGAGGTATATGGCAAAAGCTCCCGGCCGTTTGTTGCCACCCT 1502907 Query 154081 GATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGG 154140 | || || | || || |||||||| | ||||||| ||| ||| ||| ||| | | Sbjct 1502906 GGTCCACATACCGAGCCGTATTGTTGTACACGCGCAGCATTGGTACCAATCCGTTCGAAA 1502847 Query 154141 TGCCGTTGGT--CGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCC 154198 | ||||| || || | ||| | | || || || | |||||||| | || Sbjct 1502846 TCCCGTTCGTACCGGA--GATGTACGTTCCCTTCGCACGAATACAGTGCACGTTCAGCCC 1502789 Query 154199 AATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTC 154258 ||| ||||| | | ||||| || ||||| | |||||| |||||| || || Sbjct 1502788 AATTCCGCCAGCAGATTTTGAAATCAGCGCGCACTGCTTCAGCGTGTCGTAGATACCTTC 1502729 Query 154259 GATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCC 154318 || || ||||| | | |||| ||||| || ||| ||||| ||||| | Sbjct 1502728 AATACTGTCGTCAGACATGGTTAGCAGAAAACAGGATGACAACTGCGGGCGCTGCGTTGC 1502669 Query 154319 CGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAA-CAGTTTTTGGCTCATCATGCGGTACG 154377 ||| | || | ||| || || || ||||| || | | || || ||| | Sbjct 1502668 CGCTGCGAACATGGTAGGTGAGGCATGGGTAAAGTAGCGCTCCG-ACAGCAAATTGTATG 1502610 Query 154378 TTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGT 154437 | |||||||| | |||||||| || || ||||| |||| ||| |||||||| | ||||| Sbjct 1502609 TCTCGATGGCTGCATCGATATCTTCACCATGAATACCGATCGCAACGCGCATCAACATGT 1502550 Query 154438 GCTGCGGACGTTCGGCGACTCTATTGTC---AATCTTCAAGAGATATCCATTTTCGAGGG 154494 ||||||| ||||| ||| | ||| | |||||||| ||||| ||| | | Sbjct 1502549 GCTGCGGTCGTTCAACGA---TCTTGCCCCGGATCTTCAACAGATAGGATCGTTCCAAAG 1502493 Query 154495 TTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGCCGCAT 154548 ||||| | |||||||| |||||| ||||||| | || | | ||| |||| || Sbjct 1502492 TTTTGAAGCCGAAATAGTTGTATCCAAAATCACGATCGTAAATGATAGCCGAAT 1502439 >seq112 Length=21277816 Score = 129 bits (142), Expect = 6e-25 Identities = 286/422 (68%), Gaps = 14/422 (3%) Strand=Plus/Minus Query 52327 TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCA 52386 |||||||||| || ||||| | |||||| |||| |||||| |||| | | || | Sbjct 19493530 TGCCGTGCGTGAAGAAGAAGGCAGACTGGGCACTGAACTGGATCTCGAGCAAGAAGGCAA 19493471 Query 52387 CGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCT 52446 | | ||| || | || || || || ||||| || | || || ||| |||| Sbjct 19493470 ACTTTGGCGAACGTGTCGTAGCGTTTGCGGCTGTCGAAGGAATCTTCTTCAGCGGTAGCT 19493411 Query 52447 TTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACG 52506 |||||||||| || | | || | | |||| | ||||| || ||||| ||| |||| Sbjct 19493410 TTGCCGCCATTTTCTGGCTAAAGAAGCGAGGCCTTATGCCGGGACTGACCTTCTCGAACG 19493351 Query 52507 AGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGC 52566 || |||| || |||||||||||||||||| |||||||| ||||| | |||| | Sbjct 19493350 AGCTGATTTCACGCGACGAAGGACTGCACTGTGACTTTGCCTGCCTGATGTTCAAGTATC 19493291 Query 52567 GCGTGACCGAAAAATT----GGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTG 52622 ||| | |||| || ||| || ||| || ||| || || ||||| Sbjct 19493290 TGGTG-CAGAAACCTTCCAAGGAGCGGGTGACG-----GA-CATCATCCGTGATGCGGTT 19493238 Query 52623 GCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAAC-GC 52681 | ||||| | || ||||| ||| || ||||||||||| |||| || |||||| || Sbjct 19493237 GTGATCGAGCAAGAATTTTTGACGAAGGCCCTGCCGGTCGATATGCTCGGTATGAACTGC 19493178 Query 52682 GCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCA 52741 | | | |||| ||||||| ||||| ||||| |||||| || || || || | |||| Sbjct 19493177 GAACT-GATGTCGCAGTACATTGAGTTCGTGGCCGATCGTTTGCTGATGGAG-TTGGGCT 19493120 Query 52742 GC 52743 || Sbjct 19493119 GC 19493118 >seq1 Length=31626230 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | | |||||||| || |||||||||||| | Sbjct 27268655 CCCCCGCGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 27268596 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||| || || || ||||||| |||| |||||||| || || ||||| Sbjct 27268595 AGAGTGCGTCCGTCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGA 27268536 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | ||||| | || ||| ||| Sbjct 27268535 ATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACC 27268476 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | ||| | || || |||||||| || || || || |||||||| Sbjct 27268475 TCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268429 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | | |||||||| || |||||||||||| | Sbjct 27268427 CCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 27268368 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || || || ||||||| |||| |||||||| || || ||||| Sbjct 27268367 AGAGTGCGTCCATCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGA 27268308 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | ||||| | || ||| ||| Sbjct 27268307 ATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACC 27268248 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | ||| | || || |||||||| || || || || |||||||| Sbjct 27268247 TCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268201 >seq646 Length=9740529 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| || | || | ||| | | | |||||||| ||||||||||||||| Sbjct 6802127 GCCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 6802068 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || |||||| || || ||||||| | |||| |||||||| || ||||| || Sbjct 6802067 CAGTGTGCGACCGTCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGG 6802008 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || || || ||| || || | | || | || || | | ||| || Sbjct 6802007 GATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 6801948 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | |||||||| || || ||||| || || |||||||| Sbjct 6801947 CTCAAGGGTAATGGTTTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 6801900 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 |||| || | ||| | | | || ||||| |||||||||||||| || ||| || Sbjct 9473332 CGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGACCA 9473273 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| || || || |||| |||| |||||||| || ||||| || || ||||| || Sbjct 9473272 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCTTCCTTA 9473213 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||| ||| || | | ||| | ||||| | | ||| ||||| | || | Sbjct 9473212 TCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 9473153 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || || || || || ||||| || |||||||||||| Sbjct 9473152 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATG 9473117 >seq146 Length=1450147 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 57309 GTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTCGCTGCCGGT 57368 ||| |||| ||| ||| | |||||| || | ||| | || || |||||| ||||| Sbjct 688700 GTTTCCCATGTCACCGGCATGCCGCTCGTCAGCGGTCGGCGCTCCGTGTGTTTTGCCGTG 688641 Query 57369 GGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGTGAAC 57428 || || ||||| |||||| |||| |||| |||||| || ||||||||||||| |||| Sbjct 688640 CGGATTGAAGTGAGCGCCCGTCGACATGCAACCGTTGGTGTTGTCGCCGAACTCATGAAT 688581 Query 57429 GTGAAATCCGTG 57440 ||| ||||| || Sbjct 688580 GTGGAATCCATG 688569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496258194176160