Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq113 194 2e-44 >seq113 Length=1764599 Score = 194 bits (214), Expect = 2e-44 Identities = 1179/1876 (63%), Gaps = 52/1876 (3%) Strand=Plus/Plus Query 122832 GATTACGAATACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTC 122891 |||| | |||||| ||||| || | |||||| || ||| ||| || || ||| Sbjct 1502462 GATTTTGGATACAACTATTTCGGCTTCAAAACTTTGGAACGATCCTATCTGTTGAAGATC 1502521 Query 122892 GAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCAC 122951 || ||| ||| ||||| || || ||| | |||||||| || || || | || Sbjct 1502522 CGGGGCAAGATCGTTGAACGACCGCAGCACATGTTGATGCGCGTTGCGATCGGTATTCAT 1502581 Query 122952 GGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACG 123011 || || ||||| || | ||| || ||| ||||| |||| | | || || Sbjct 1502582 GGTGAAGATATCGATGCAGCCATCGAGACATACAATTTGCTGTCGGAGCGCTACTTTACC 1502641 Query 123012 CACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTT 123071 || || || || ||||||| || | ||| || || |||||||| || |||||| Sbjct 1502642 CATGCCTCACCTACCATGTTCGCAGCGGCAACGCAGCGCCCGCAGTTGTCATCCTGTTTT 1502701 Query 123072 TTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCG 123131 |||| ||| || || ||||| || |||||||| || || || | |||||| Sbjct 1502702 CTGCTAACCATGTCTGACGACAGTATTGAAGGTATCTACGACACGCTGAAGCAGTGCGCG 1502761 Query 123132 TTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGC--G 123189 ||||||| |||| || ||||| || || ||||||||||| ||| | || | Sbjct 1502762 CTGATTTCAAAATCTGCTGGCGGAATTGGGCTGAACGTGCACT--GTATTCGTGCGAAGG 1502819 Query 123190 GAAGCCGCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTT 123249 ||| |||| | || |||| || | ||| | | | | |||||||| || | Sbjct 1502820 GAACGTACATCTCCGGTACGAACGGGATTTCGAACGGATTGGTACCAATGCTGCGCGTGT 1502879 Query 123250 ACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAA---ACGCAAAGGCGCGATGGCGA 123306 |||| || | | ||| | || |||||||| ||||| ||| || || | || | Sbjct 1502880 ACAACAATACGGCTCGGTATGTGGACCAGGGTGGCAACAAACGGCCGGGAGCTTTTGCCA 1502939 Query 123307 TCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGG 123366 | || || ||||| ||||||| ||||| | ||| ||| | || |||| |||| | Sbjct 1502940 TATACCTCGAACCATGGCACGGCGATGTATTCGAGTTTCTGGATCTAAAGAAGAACACCG 1502999 Query 123367 GGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTA 123426 | ||| || | || ||||| |||| ||||| | ||| |||| || |||| | Sbjct 1503000 GCAAGGAGGAGGTGCGTGCACGCGACATGTTCTACGCACTGTGGATACCGGACCTGTTCA 1503059 Query 123427 TGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCC---CGATCGGTGTCCCG 123483 || || ||| | | ||| ||||| || |||||||| |||| ||||||| Sbjct 1503060 TGAAGCGGGTAGAGGCGAACGAAATGTGGAGCCTGATGTGTCCTCACGAT---TGTCCCG 1503116 Query 123484 GCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAG 123543 | ||| || || ||| | |||| || | ||||| | ||||| || | Sbjct 1503117 GATTGGCAGAAACTTGGGGCGAAGAGTTCGAGACGCTGTACACCGGTTACGAAAAAGAGG 1503176 Query 123544 GCAAACAGGTTAGTC---AGGTTCCGGCACGTGATTTGTTCAAATTTATTATCGAAACAC 123600 | || ||| || |||| ||| | ||||||| || || ||| | | Sbjct 1503177 G---ACGCTTTATTCGACAGGTGAAGGCGCAAGATTTGTGGTTCGCGATCATTGAATCGC 1503233 Query 123601 AAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATC 123660 | || ||||| || ||||| ||||| ||||| || || ||||| | |||| ||| | Sbjct 1503234 AGGTGGAAACGGGCGTACCGTATATGCTGTACAAGGATGCATGCAATCGTAAAAGCAACC 1503293 Query 123661 AGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATA--CAG 123718 | ||| | ||||| || || || || | ||| |||||||| | || || | Sbjct 1503294 AACAGAACGTTGGAACCATTAAGTGCTCCAACTTGTGCACCGAAATTGTGGAGTATTCGT 1503353 Query 123719 CGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAA-----TCGTTGC 123773 ||| ||| | | || || || ||| |||| |||||| |||| |||| Sbjct 1503354 CGAAA--GATGAGATTGCGGTTTGCAATCTGGCCTCGATTGCACTGAACATGTTCGTAAA 1503411 Query 123774 GTCGAAAACGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAG 123833 | | | | | | | | ||| | || ||| || | | || | | || | | Sbjct 1503412 GGCTGACAGGACA-TACGACTTTGCGAA-GCTGAAGGATGTCGCCAAGA---TCGTTACG 1503466 Query 123834 ---AATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGC---GCGTTTG 123887 ||| |||||||||| ||||| | || | ||||| | |||||| ||| | Sbjct 1503467 CGCAATCTGAACAAAATCATCGACATCAACTACTATCCGGTACCGGAAGCAAAGCGCT-- 1503524 Query 123888 TCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTA 123947 | ||| || || || || |||| | || | || || ||||||| || || | Sbjct 1503525 -CCAATATGCGCCATAGGCCCATCGGTATCGGTGTGCAGGGCATGGCCGATGCATTCATT 1503583 Query 123948 ATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAA 124007 || ||||| || ||||||||||| || ||| | ||| ||| |||||| ||| Sbjct 1503584 TTGATGCGCTATCCATACGAAAGCGAAGAGGCACAAAAGCTGAATCAACAAATATTTGAA 1503643 Query 124008 ACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTAC 124067 | ||||| || || || |||| || |||||||| | || | | || ||||| Sbjct 1503644 TCCATTTACTATGGGGCGCTGGAAGCTAGCTGCGAGTTGGCAGCACGGGAAGGTCCGTAC 1503703 Query 124068 GAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCT 124127 || | || || || || |||| |||| ||| |||||||| ||||| |||||||| Sbjct 1503704 GAGACATATGCAGGAAGTCCGGTGAGCAAAGGCATTTTGCAATACGAGATGTGGAAGAAG 1503763 Query 124128 ACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCG--ACGCACGGTT 124185 |||||| || | ||| ||||| | | ||| | | | |||| | |||||| Sbjct 1503764 GAACCGACGGATCTTTGGAACTGGGCTGAGCTGAAAGA--GAAGATCGCAAAGCACGGCA 1503821 Query 124186 TGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAA 124245 | ||||| ||||| || |||| |||||||| || | || || |||||||| || | Sbjct 1503822 TTCGTAATTCGCTACTGTTGGCCCCGATGCCGACCGCTTCGACGGCGCAAATTTTGGGCA 1503881 Query 124246 ACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCG 124305 |||| || || |||||||||| ||| || | ||| ||||| ||| || | |||| Sbjct 1503882 ACAATGAGTCTTTCGAGCCGTACACGTCGAACGTTTACAATCGACGTGTGCTATCGGGCG 1503941 Query 124306 ATTTTCAAGTGATAAATCATCATTTGGTGGACGACTTGGTGGCGTTAAATTTGTACGATG 124365 | || || ||| | || |||||| | || | || || ||| | | | ||| Sbjct 1503942 AGTTCCAGGTGGTGAACCATCATCTACTGCAAGATCTGACTGCGATGGGCCTATGGGATC 1504001 Query 124366 AAAACATGCGCAACGAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTC 124425 | ||| ||| | ||| | | ||| | | ||| ||| | ||||||| Sbjct 1504002 TCGATATGAAGAACAACATTTTGTCTAATAATGGTTCCATTCAGAACATTGAATCGATTC 1504061 Query 124426 CGGAACACGTCAAGCAACTGTACAAAACCGTGTGGGAAAT---GAAAAATAAACGATTAA 124482 || | | || | || |||||||| |||||||| || | || ||||| | | Sbjct 1504062 CGCAGGAGATCCGCGACCTCTACAAAACGGTGTGGGAGATTTCGGTAA--AAACG-TGCA 1504118 Query 124483 TTGAAATGGCCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTTG 124542 || ||||||| | ||| || || || | | ||||| ||||| || ||| | | Sbjct 1504119 TTAAAATGGCTGCCGATCGCGGGGCATTTATCGATCAGTCACAATCGTTCAACATACACG 1504178 Query 124543 TAGCGGAACCCACCTACGCCCGCATGACCAGCATACACATGCACGCGTGGAGCAGCGGAC 124602 | || || || | ||| | | |||| || || | ||| |||| | |||| Sbjct 1504179 TGGCCGAGCCGAACTATGGCAAGCTGACGTCGATCCATTTCTACGGCTGGAAGATGGGAC 1504238 Query 124603 TCAAAACGGGCATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACCG 124662 | || ||||||||||| || || | ||||| ||||| | |||| || || || || | Sbjct 1504239 TGAAGACGGGCATGTACTATTTGCGCACCAAGCCGGCCGTTAATGCAATCCAGTTCACGG 1504298 Query 124663 TCGACAAATCTAAACT 124678 | |||||||| || || Sbjct 1504299 TAGACAAATCGAAGCT 1504314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451999369272880