Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq113 143 4e-29
seq112 127 3e-24
>seq113
Length=1764599
Score = 143 bits (158), Expect = 4e-29
Identities = 332/498 (67%), Gaps = 2/498 (0%)
Strand=Plus/Minus
Query 203833 CTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTA 203892
||||| ||||| ||||||||||| || || || ||||| ||| || | | || ||||||
Sbjct 1504312 CTTCGATTTGTCTACCGTGAACTGGATTGCATTAACGGCCGGCTTGGTGCGCAAATAGTA 1504253
Query 203893 CATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC 203952
|||||| ||||| || ||| ||| ||| ||||| | || || || | ||| ||||
Sbjct 1504252 CATGCCCGTCTTCAGTCCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATA 1504193
Query 203953 GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATC 204012
||| || ||||||| ||| ||||| | || || || ||||| || | | | |||||
Sbjct 1504192 GTTCGGCTCGGCCACGTGTATGTTGAACGATTGTGACTGATCGATAAATGCCCCGCGATC 1504133
Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCT 204072
|| ||||| || || || || |||||||||||||||||| ||| | | ||| |
Sbjct 1504132 GGCAGCCATTTTAATGCACGTTTTTACCGAAATCTCCCACACCGTTTTGTAGAGGTCGCG 1504073
Query 204073 GGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCA 204131
| | | || || | || | | || ||| || || || || | | || | |
Sbjct 1504072 GATCTCCTGCGGAATCGATT-CAATGTTCTGAATGGAACCATTATTAGACAAAATGTTGT 1504014
Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGA 204191
|| || | || |||| | ||||| | |||| || ||| || || |||| |
Sbjct 1504013 TCTTCATATCGAGATCCCATAGGCCCATCGCAGTCAGATCTTGCAGTAGATGATGGTTCA 1503954
Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251
| ||| || || || || ||||| | ||| || | | ||| ||| | || ||||
Sbjct 1503953 CCACCTGGAACTCGCCCGATAGCACACGTCGATTGTAAACGTTCGACGTGTACGGCTCGA 1503894
Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311
| | ||| |||||||| ||||| || || || || || ||||| || |||| || |
Sbjct 1503893 AAGACTCATTGTTGCCCAAAATTTGCGCCGTCGAAGCGGTCGGCATCGGGGCCAACAGTA 1503834
Query 204312 GGGAGTTGCGCACACCGT 204329
| || || || | ||||
Sbjct 1503833 GCGAATTACGAATGCCGT 1503816
Score = 93.3 bits (102), Expect = 7e-14
Identities = 428/668 (64%), Gaps = 12/668 (2%)
Strand=Plus/Minus
Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942
|||||| || |||||||||||||| |||||| | || || | ||| |||||
Sbjct 1503346 CTCCACAATTTCGGTGCACAAGTTGGAGCACTTAATGGTTCCAACGTTCTGTTGGTTGCT 1503287
Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCG 205002
|| || || || | |||||||||| ||| |||| | || | |||| ||| |||
Sbjct 1503286 TTTACGATTGCATGCATCCTTGTACAGCATATACGGTACGCCCGTTTCCACCTGCGATTC 1503227
Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC--CCTTGAGAC 205060
| || | |||||| || | |||| ||| || || || | | || |
Sbjct 1503226 AATGATCGCGAACCACAAATCTTGCGCCTTCACCTG--TCGAATAAAGCGTCCCTCTTTT 1503169
Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACAT 205120
||||| |||||||||| | | || || || | || || || |||||
Sbjct 1503168 TCGTAACCGGTGTACAGCGTCTCGAACTCTTCGCCCCAAGTTTCTGCCAATCCGGGACAA 1503109
Query 205121 TTTTTGGGACACATCAGAGACCACATCT-GATCGTCTTTCACCCTCTCCATAAACAGGTC 205179
| | ||||||||||| |||||| | | ||| || | |||| || ||| ||||||||
Sbjct 1503108 TCGTGAGGACACATCAGGCTCCACATTTCGTTCGCCTCT-ACCCGCTTCATGAACAGGTC 1503050
Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239
|||||||| |||| |||| || || || | | | || | || ||||||
Sbjct 1503049 CGGTATCCACAGTGCGTAGAACATGTCGCGTGCACGCACCTCCTCCTTGCCGGTGTTCTT 1502990
Query 205240 TTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTG 205298
|| | ||||| || || | | ||| ||||||| || || | | | ||| | |
Sbjct 1502989 CTTTAGATCCAGA-AACTCGAATACATCGCCGTGCCATGGTTCGAGGTATATGGCAAAAG 1502931
Query 205299 CGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCA 205358
| || |||| ||||| |||||||||||||| |||| | | |||| | || ||||
Sbjct 1502930 CTCCCGGCCGTTTGTTGCCACCCTGGTCCACATACCGAGCCGTATTGTTGTACACGCGCA 1502871
Query 205359 GCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCC 205418
|||| || |||| ||||| | |||||||||| | | |||| || || | || |
Sbjct 1502870 GCATTGGTACCAATCCGTTCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCAC 1502811
Query 205419 --TCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACTC 205476
|| || | | | || ||||| ||||||| | | || | ||| | |||||||
Sbjct 1502810 GAATACAGTGCACGT-TCAGC-CCAATTCCGCCAGCAGATTTTGAAATCAGCGCGCACTG 1502753
Query 205477 TTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACGA 205536
| ||| ||| |||||| ||| | || ||||| | || || | |||| | || ||
Sbjct 1502752 CTTCAGCGTGTCGTAGATACCTTCAATACTGTCGTCAGACATGGTTAGCAGAAAACAGGA 1502693
Query 205537 AGCCAGCT 205544
| || ||
Sbjct 1502692 TGACAACT 1502685
>seq112
Length=21277816
Score = 127 bits (140), Expect = 3e-24
Identities = 234/340 (69%), Gaps = 5/340 (1%)
Strand=Plus/Plus
Query 159745 CAGCAACCTGTCTGCCACAAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCA 159803
|||||| | || ||||| || || ||||| || | ||||| | || ||||| || || |
Sbjct 19493133 CAGCAAACGATCGGCCACGAACTCAATGTA-CTGCGACATCAGTTCGCAGTTCATACCGA 19493191
Query 159804 GCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCA 159863
||| || || || || | || || ||| || | ||| ||| | ||||| || |
Sbjct 19493192 GCATATCGACCGGCAGGGCCTTCGTCAAAAATTCTTGCTCGATCACAACCGCATCACGGA 19493251
Query 159864 CAATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923
|| | || || || || | || || || | | | ||| |||| ||||
Sbjct 19493252 TGATGTCCGTCACCCGCTCCTTGGAAGGTTTCTGCACCA---GATACTTGAACATCAGGC 19493308
Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983
| |||||||| ||||||||||| ||||| || || || | |||||| || | | | || |
Sbjct 19493309 AGGCAAAGTCACAGTGCAGTCCTTCGTCGCGTGAAATCAGCTCGTTCGAGAAGGTCAGTC 19493368
Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043
||||||| | || ||| || ||||| |||||||| ||||| |||||| || ||||
Sbjct 19493369 CCGGCATAAGGCCTCGCTTCTTTAGCCAGAAAATGGCGGCAAAGCTACCGCTGAAGAAGA 19493428
Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083
| || || || ||||||||||| |||| | || |||||
Sbjct 19493429 TTCCTTCGACAGCCGCAAACGCTACGACACGTTCGCCAAA 19493468
Score = 86.0 bits (94), Expect = 1e-11
Identities = 167/241 (69%), Gaps = 7/241 (3%)
Strand=Plus/Plus
Query 160214 GAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCC 160273
|||||||| || |||||||||||| || || || ||||| ||| || | |||
Sbjct 19493686 GAGTACATCTCGCTGTGCACATTTTCCATCGCTATTTGAAACCCGTAAAAGCAGCGTGCC 19493745
Query 160274 TCCAGATA-CTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTC 160332
||| | || ||| |||||||| |||| | | |||| || | ||||| | || ||
Sbjct 19493746 TCC-GTTACCTGTACCTCCTGGCTGAAGCGCTCCACCAGGTTTTCGTTAACGATACCATC 19493804
Query 160333 GGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTC- 160391
|| || |||||||| || | |||||| ||||||||||| | ||| || ||| ||
Sbjct 19493805 GGATGCGGCAAAGAAGGCAAGCACGTGCGAGATGAAATGACGTTCG-CTCGGTT---TCA 19493860
Query 160392 TCTTTTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAG 160451
| |||||| | ||| ||| | || | ||| ||||||||| || ||||| || ||
Sbjct 19493861 GCGATTCCCAATCCTTCATGTCCTTGGAGAGATCGACCTCTTCCACGGTCCAAAAGGAAG 19493920
Query 160452 C 160452
|
Sbjct 19493921 C 19493921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795148461059680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |