Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 430 2e-115 seq112 327 1e-84 seq57 107 2e-18 >seq1 Length=31626230 Score = 430 bits (476), Expect = 2e-115 Identities = 826/1210 (68%), Gaps = 12/1210 (1%) Strand=Plus/Minus Query 6943 AGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTC 7002 ||| |||| || || ||||| || ||||| || | || | ||| || || || || Sbjct 3915903 AGTCTCGATACCGAGCGACAGCGGCGTCACATCGAGCAGCAGCAGATCCTGCACCTCCTC 3915844 Query 7003 GTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATC 7062 | ||||| | ||||||||| ||||| | || ||||| ||||| ||||| || Sbjct 3915843 CGACTTGTCACCATGCAGGATGGCGGCCTGGACGGCGGCACCGTAAGCGACGGCCTCGTC 3915784 Query 7063 GGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAAT 7122 ||||| || | || ||||| || ||||| || || | ||| | || | || | Sbjct 3915783 CGGGTTGATGGACTTGTTCAGCTCCTTACCATTGAAGAAGTCCTGCAGCAGCTTCTGCAC 3915724 Query 7123 TTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGAT 7182 || ||||| || ||||||||||| |||| || || || | | | | || || || Sbjct 3915723 CTTGGGGATACGGGTCGATCCACCAACCAGCACAATGTCGTGGATGCTGGCCTTGTCCAT 3915664 Query 7183 CTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATAC 7241 ||| | ||| ||||| | || ||||| || ||||| | | | ||||||| ||| Sbjct 3915663 CTTGGCGTCACGAAGCGCCTTCTCGACTGGCTCCAT-CGTCGAGCGGAACAGGTCGGCGT 3915605 Query 7242 ACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACG 7301 ||| ||||| || || ||||| || || || || |||||||| || ||| | | || Sbjct 3915604 TCAGCTCCTCGAAGCGGGCACGCGTGATCGAGGTGTAGAAATCGGTTCCCTCGAACAGCG 3915545 Query 7302 AATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 |||| || |||||| | | || | || |||||| | ||| ||||| || ||||| || | Sbjct 3915544 AATCGATCTCAATGCTGGCCTGGGTCGACGAAGACAGCGTACGCTTCGCACGCTCGCATG 3915485 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 |||| || | |||||| ||||||||| ||| ||| | ||| ||||| ||||| || | Sbjct 3915484 CCGTGCGCAGACGACGCAGGGCACGCTTGTTGGTGGACAGATCCTTCTTGTGTTTGCGCT 3915425 Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481 | || || | || |||||| | || | ||||| || |||||||||| || | Sbjct 3915424 TGAATTCCTGAGCGAAGTGGTTCACCAGACGGTTGTCGAAGTCCTCACCACCCAGATGGG 3915365 Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541 | || || ||||||| ||||| || ||||| || | || ||| | | ||| |||| Sbjct 3915364 TGTCTCCGGCGGTCGACTTGACCTCGAAGATGCCATCGTCGATGGAAAGGATCGACACAT 3915305 Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTAT 7601 | || ||||| || ||||| || || || || ||||| ||| || | | ||||||| Sbjct 3915304 CGAAGGTACCGCCGCCCAGATCGAAGATCAGCACGTTGCGCTCGCCGGCCGTCTTCTTAT 3915245 Query 7602 CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGC 7661 | |||||||| ||||| || ||||| || || || || || ||||| || ||||| | Sbjct 3915244 CCAGACCGTAGGCGATGGCGGCCGCGGTCGGCTCGTTGATGATACGCAGCACGTTCAATC 3915185 Query 7662 CAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGA 7721 | | ||| || | ||||| ||||| || || || ||||||||||| |||||||| || | Sbjct 3915184 CGGAAATGGTACCGGCATCCTTCGTTGCCTGGCGCTGCGAATCGTTGAAGTAGGCTGGCA 3915125 Query 7722 CCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTT 7781 | || | ||| |||| ||| || |||| || || || | ||| || | || ||||| | Sbjct 3915124 CGGTAATGACGGCGTTCGTCACCGTCTTGCCCAGGTAAGCTTCGGCCGTTTCCTTCATCT 3915065 Query 7782 TGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAAT 7841 |||| || |||||||| | |||||| | ||| |||| | || || || | | Sbjct 3915064 TGGTCAGCACCATCGAACTGACCTCTTCCGGGAAGAACGATTTCTTCTCGCCCTTGTACT 3915005 Query 7842 CAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCA 7901 | || ||||| | ||||| || | | | | |||| ||| ||| | |||| Sbjct 3915004 CGACCGCAATCTTTGGTTTGCCCTC-GATC--GACTCCACCTCGAACGGCCAGTGCTTCA 3914948 Query 7902 TATCGTCTTGGACCTGTTGG--TCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAA 7959 | ||| | |||| || || || |||||| | || || ||||| || ||||| || Sbjct 3914947 TGTCGGCCTGGA--TGGCGGGATCGTCAAACTTGCGGCCAATCAGACGTTTGGCATCGAA 3914890 Query 7960 AACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTC 8019 | ||||| | ||||||||||| |||||||| || || || || || ||||| || Sbjct 3914889 GATCGTGTTGGTCGGGTTCATGGCCACCTGGTTCTTGGCAGCATCGCCAATCAGACGCTC 3914830 Query 8020 ATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAAT 8079 | || || || || || |||||||| || ||||| || || ||||| || ||||| Sbjct 3914829 ---CGTGTCAGTGAAGGCAACATACGATGGTGTGGTTCGGTTACCCTGGTCATTGGCAAT 3914773 Query 8080 AATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAAT 8139 |||||||| | ||| || | || ||||| || || || || || | |||||| Sbjct 3914772 GATTTCTACTTTGCCGTGCTGGAAAACTCCGACACAGCTGTAGGTCGTGCCCAGATCAAT 3914713 Query 8140 ACCGATTGCT 8149 ||| | |||| Sbjct 3914712 ACCAACTGCT 3914703 Score = 226 bits (250), Expect = 4e-54 Identities = 474/695 (68%), Gaps = 20/695 (3%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||||| || || || || || || || ||||| | ||| Sbjct 30784103 TCGAAATCTTCACCACCCAGATGGGTGTCACCGTTCGTGGCCACCACCTCAAACACACCG 30784162 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||| | | || ||| ||||| || ||||| |||||||| || || | || || Sbjct 30784163 TTGTCGATGGTCAGCAGCGACACATCGAAGGTACCGCCACCCAGATCGAACACCAGCACA 30784222 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | ||| | || || ||| || |||||||| || || || || || || ||||| Sbjct 30784223 TTCTTTTCGCCATCCTT---CTTGTCCAGACCGTAGGCAATGGCGGCGGCTGTCGGTTCG 30784279 Query 7637 TTAATAATACGAAGACAGTTC-AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || ||||| | || | | || || || || ||| ||||||| |||||||| || || Sbjct 30784280 TTGATGATACGCAT-CACTACCAGCCCGGCGATTGTTCCCGCATCCTTCGTCGCCTGACG 30784338 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || | |||||||||||||||||| ||||| || || |||| ||| || ||||| ||||| Sbjct 30784339 CTGGGCATCGTTAAAGTAGGCCGGTACCGTGACAACTGCGTGCGTAACCTTCTTTCCGAG 30784398 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || | ||| || | || ||||| ||| || ||||| | || || ||||| | ||| Sbjct 30784399 GTATGCTTCGGCCGTTTCCTTCATCTTGCCCAGCACCATGGCGGAGATTTCTTCCGGCGC 30784458 Query 7816 --AAACTGTTTCG-TTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCAC- 7871 | || | ||| | ||| | | || | || ||||| || || | Sbjct 30784459 GAACACCTTATCGCCCTGGCCGGTCGA---TACCTTGATGTGCGGTTT---CG-AGTTCT 30784511 Query 7872 CGGGGATAACCTTATAC--GACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAA 7929 || ||||| || || || || || |||| || || ||||| | || Sbjct 30784512 TCTCAATCACCTTGAACGGGAGCA--GCTTAATGTCGTGCTGCACGGTATGGTCGGTGAA 30784569 Query 7930 CTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTG 7989 || | || || | |||||| ||||| || || ||||||| ||||||| | | || Sbjct 30784570 CTCGCGGCCAATCAAACGCTTCGCATCGAACACGGTGTTTTCGGGGTTCGTCGTCAGCTG 30784629 Query 7990 GTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGG 8049 |||||| || || || ||||| | |||||| | | ||||| || |||||||| || Sbjct 30784630 GTTCTTGGCGGCATCACCGATCAAACGTTCGCCGTCGGCGGTAAATGCCACGTACGAGGG 30784689 Query 8050 GGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCC 8109 || | || || || || ||||| |||||||||||||| || |||||| | || || Sbjct 30784690 CGTAATACGGTTACCCTGATCGTTGGCAATAATTTCTACACGTCCGTTTTTGTACACACC 30784749 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGA 8144 |||||| || || ||||| || | ||| ||||||| Sbjct 30784750 GACGCAGGAGTATGTTGTGCCGAGATCGATACCGA 30784784 >seq112 Length=21277816 Score = 327 bits (362), Expect = 1e-84 Identities = 698/1034 (68%), Gaps = 9/1034 (1%) Strand=Plus/Plus Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||| | ||| ||| ||||| | ||||| ||||| || |||||||||| || | | Sbjct 17373872 GTCATTACACCGCCCGCCGTTTCAATACCAAGCGACAGGGGCGTCACGTCCAGCAGCAGC 17373931 Query 6986 AGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 || || || || | ||| |||||| | |||||||||||| || | || ||| Sbjct 17373932 AGATCCTGTACCGCTTCCGAGGTATCACCCTGCAGGATGGCGGCTTGTACGGCTGCACCG 17373991 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || || ||||| || || |||| ||| ||||| || || ||||| || | ||| Sbjct 17373992 TACGCAACGGCTTCATCCGGATTGATCGATTTGTTCAGCTCCTTGCCGTTGAAGAAGTCC 17374051 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 | || | || | || ||||| || ||||||||||| || | || || || | Sbjct 17374052 TGCAGCAGCTTCTGCACCTTGGGGATGCGAGTCGATCCACCCACGAGCACAATGTCGTGG 17374111 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 | ||| ||||| ||||||| || || |||| || ||| |||||||| | Sbjct 17374112 ATGCTCGCCTTATCCATCTTTGCATCGCGCAGTGCCTTCGAGACCGGTTCCATCGTGTCC 17374171 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||||| ||| ||| |||||||| || || || || ||||| || || |||||| Sbjct 17374172 CGGAACAGATCCGAGTTCAGCTCCTCAAACCGAGCGCGCGTGATGGAGGTGTAAAAATCA 17374231 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | || || || ||||||||||| || ||| | | || | | | || ||||| ||| Sbjct 17374232 ATACCCTCATACAACGAATCAATCTCGATGCTAGCCTGGGTAGAGGCGGACAACGTGCGC 17374291 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || | ||| || ||||| || || || || ||||| ||| ||| | | |||||| Sbjct 17374292 TTCGCCCTCTCGCATGCCGTACGCAACCGGCGCAGGGCGCGCTTGTTGCTCGTAATATCC 17374351 Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 ||||| || || || || ||||| || |||||| | | | || || || Sbjct 17374352 TTCTTGTGCTTGCGCTTGAACTCCTCCACGAAGTGGGACACCATGCGGTTGTCAAAGTCC 17374411 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 || || || | ||| || || || || |||| ||||| || ||||| || | || || Sbjct 17374412 TCCCCGCCAAGGTGAGTGTCACCGGCCGTCGACTTGACCTCGAAGATGCCATCCTCGATC 17374471 Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585 | | | ||| ||||||||||| ||||| ||||| || || || || ||||| ||| Sbjct 17374472 GTGAGGATCGACACATCAAACGTGCCACCGCCCAGATCGAAGATCAGCACGTTGCGCTCG 17374531 Query 7586 TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATA 7645 | | | |||||| || | |||||| || | || |||||||| ||||| || ||||| Sbjct 17374532 CCTTTTAGGTTCTTGTCCAAACCGTAGGCCAGGGCGGCCGCCGTCGGTTCGTTGATAATG 17374591 Query 7646 CG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704 || | ||| ||||| || ||||| | | ||||| ||||| || ||||| || || Sbjct 17374592 CGCATCACA-TTCAGACCCGCAATTGCCCCGGCATCCTTCGTAGCCTGTCGCTGGCTGTC 17374650 Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764 ||| ||||||||||| || || | |||||||| | | || | || || || | || Sbjct 17374651 GTTGAAGTAGGCCGGAACTGTAATGACCGCGTTCTTCACCGAGTGGCCCAGGTATGCCTC 17374710 Query 7765 CGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTT 7824 || | || ||||| || || || |||||||| |||| || || | || || Sbjct 17374711 GGCCGTTTCCTTCATCTTCGTCAGCACCATCGAGGAAACTTCCTCCGGGAAGAAGGACTT 17374770 Query 7825 CGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAG-CACCGGGGATAACCT 7883 | | || || || | || || | | | | |||||| |||| | ||| ||| || | Sbjct 17374771 CTTGTCGCCCTTGTACTCGACCTGCAGCTTCGGTTTA-CCGCCGTCAC---TGATGACTT 17374826 Query 7884 TATACGACCAATCTTTCATATCGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATA 7942 | ||| ||||| ||||| ||| || | | |||| ||| ||| || | || || Sbjct 17374827 CAAACGGCCAATGCTTCATGTCG-CTCTGTACGGTTGCGTCGTCAAATTTACGACCAATC 17374885 Query 7943 AGACGCTTTGCATC 7956 |||||||||||||| Sbjct 17374886 AGACGCTTTGCATC 17374899 >seq57 Length=3884199 Score = 107 bits (118), Expect = 2e-18 Identities = 151/210 (72%), Gaps = 8/210 (4%) Strand=Plus/Minus Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594 |||| ||| ||||||||||| || || || | | | | | || |||| ||| Sbjct 2028822 GAAATATCGAACGTACCACCGCCAAGATCGTACACGGCAATGATCTTATCCTCGC----- 2028768 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACA 7653 |||| || | |||||| || | ||||| || || ||||| ||||| | ||| || ||| Sbjct 2028767 -TCTTGTCCATACCGTATGCCAGGGCCGCAGCGGTCGGTTCGTTAATCACACGCAACACA 2028709 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 |||| || ||||| ||||||| ||||| || || || || |||||||||||||| Sbjct 2028708 -TTCAACCCGGCAATCTGGCCCGCATCCTTCGTGGCCTGACGCTGAGAATCGTTAAAGTA 2028650 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGAC 7743 |||||| || || |||||||| | | |||| Sbjct 2028649 GGCCGGCACAGTAACGACCGCATTCTTGAC 2028620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635127417249520