Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1 147 5e-30 seq646 111 3e-19 >seq1 Length=31626230 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| || || || || ||||| || ||||| | ||||| | ||||| || Sbjct 15287646 ACCAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCCGACAGAGTGCGGCCATCCTCC 15287587 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| ||||||||||| || || || || ||||| || || || || ||||| ||| Sbjct 15287586 AGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGA 15287527 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| |||||||| ||||| || ||| ||||| |||||||| | ||||||| Sbjct 15287526 ATCTTGGCCTTAACGTTCTCGATGGTATCGGAAGGCTCCACCTCAAGGGTGATCGTCTTT 15287467 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 15287466 CCAGTCAGGGTCTTGACGAAGATCTGCAT 15287438 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || || ||||| |||| ||||| | |||||||| ||||||||||| Sbjct 27268397 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCCAGCTGCTTACCG 27268338 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || || |||||||||||||| || ||||| || || || ||| Sbjct 27268337 GCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTC 27268278 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 |||||||| || |||||||| || || || || || | ||||| || |||| || Sbjct 27268277 ACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTC 27268218 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 27268217 TTCACGAAGATCTGCAT 27268201 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || || ||||| |||| ||||| | || ||||| ||||||||||| Sbjct 27268625 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCTTCCAGCTGCTTACCG 27268566 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || || |||||||||||||| || ||||| || || || ||| Sbjct 27268565 GCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTC 27268506 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 |||||||| || |||||||| || || || || || | ||||| || |||| || Sbjct 27268505 ACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTC 27268446 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 27268445 TTCACGAAGATCTGCAT 27268429 >seq646 Length=9740529 Score = 111 bits (122), Expect = 3e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| || ||||| || ||||| ||||| |||| || || | || || || Sbjct 6802108 ACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGTGTGCGACCGTCCTCC 6802049 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||| || || || || || || || ||||| || || || || Sbjct 6802048 AGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTATCCTGG 6801989 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || ||||| || || ||||| || || |||||||||| || || Sbjct 6801988 ATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTTTTA 6801929 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| ||||| | ||||| Sbjct 6801928 CCCGTGAGGGTTTTGACGAAGATCTGCAT 6801900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109471962072026