Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq113 129 7e-25
seq112 100 3e-16
>seq113
Length=1764599
Score = 129 bits (142), Expect = 7e-25
Identities = 374/574 (65%), Gaps = 4/574 (1%)
Strand=Plus/Minus
Query 48264 TCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGT 48323
|| || ||||| | ||| | || || || ||||| || | || ||| | |||||||||
Sbjct 1503009 TCCTCCTTGCCGGTGTTCTTCTTTAGATCCAGAAACTCGAATACATCGCCGTGCCATGGT 1502950
Query 48324 TCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCA 48383
|| | ||||| || | | || || ||||| || || || || || | ||| | ||
Sbjct 1502949 TCGAGGTATATGGCAAAAGCTCCCGGCCGTTTGTTGCCACCCTGGTCCACATACCGAGCC 1502890
Query 48384 GTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAA 48443
|||||||| || || | | |||||| || | || || || || || || || || ||
Sbjct 1502889 GTATTGTTGTACACGCGCAGCATTGGTACCAATCCGTTCGAAATCCCGTTCGTACCGGAG 1502830
Query 48444 ATATAACTTCCACTAGCTCTTATAT--TACTAATTGAAATACCTATACCACCTGCCATTT 48501
|| || |||| | || | ||| | | || | || || || || || ||
Sbjct 1502829 ATGTACGTTCCCTTCGCACGAATACAGTGCACGTTCAGC--CCAATTCCGCCAGCAGATT 1502772
Query 48502 TAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCA 48561
| || || || || ||| | || || || || || || ||||| ||||| || || ||
Sbjct 1502771 TTGAAATCAGCGCGCACTGCTTCAGCGTGTCGTAGATACCTTCAATACTGTCGTCAGACA 1502712
Query 48562 TATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTG 48621
| ||| |||||||| |||| ||||| | ||| | | || | || |
Sbjct 1502711 TGGTTAGCAGAAAACAGGATGACAACTGCGGGCGCTGCGTTGCCGCTGCGAACATGGTAG 1502652
Query 48622 GAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTA 48681
| || ||||| |||| | ||| || | ||| || ||||| || || | | ||| |
Sbjct 1502651 GTGAGGCATGGGTAAAGTAGCGCTCCGACAGCAAATTGTATGTCTCGATGGCTGCATCGA 1502592
Query 48682 TATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAA 48741
|||| ||| ||||| || | || ||||| ||||| | || |||| |||||| |
Sbjct 1502591 TATCTTCACCATGAATACCGATCGCAACGCGCATCAACATGTGCTGCGGTCGTTCAACGA 1502532
Query 48742 TTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGT 48801
| ||| || ||||| ||||| ||| |||||| ||||| || || ||||||||||
Sbjct 1502531 TCTTGCCCCGGATCTTCAACAGATAGGATCGTTCCAAAGTTTTGAAGCCGAAATAGTTGT 1502472
Query 48802 ATGAAAAGTCGTTATCATTAATAATTGATGAATT 48835
|| ||| || ||| | ||| || | |||||
Sbjct 1502471 ATCCAAAATCACGATCGTAAATGATAGCCGAATT 1502438
>seq112
Length=21277816
Score = 100 bits (110), Expect = 3e-16
Identities = 180/263 (68%), Gaps = 0/263 (0%)
Strand=Plus/Plus
Query 18943 AGATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAAT 19002
|||| || ||||||| || ||||| ||||| || ||||| ||||| | ||||
Sbjct 19493290 AGATACTTGAACATCAGGCAGGCAAAGTCACAGTGCAGTCCTTCGTCGCGTGAAATCAGC 19493349
Query 19003 TCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCA 19062
|| || || || || | || ||||| || |||| || |||| |||||| || | |||
Sbjct 19493350 TCGTTCGAGAAGGTCAGTCCCGGCATAAGGCCTCGCTTCTTTAGCCAGAAAATGGCGGCA 19493409
Query 19063 AATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAA 19122
|| || ||||| || ||||| || || ||||| || || | | ||| ||| |
Sbjct 19493410 AAGCTACCGCTGAAGAAGATTCCTTCGACAGCCGCAAACGCTACGACACGTTCGCCAAAG 19493469
Query 19123 CTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGC 19182
| || | || | ||||| ||||||||||| || |||||||| || || || |||
Sbjct 19493470 TTTGCCTTCTTGCTCGAGATCCAGTTCAGTGCCCAGTCTGCCTTCTTCTTCACGCACGGC 19493529
Query 19183 ATTGTCTCTATAGAATTAAATAG 19205
| || || || | ||| |||||
Sbjct 19493530 AACGTTTCAATGGCATTGAATAG 19493552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562104036127920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |