Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 5e-24
seq46 87.8 1e-11
>seq1
Length=31626230
Score = 129 bits (142), Expect = 5e-24
Identities = 185/258 (72%), Gaps = 6/258 (2%)
Strand=Plus/Plus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
||||| ||| | || || || || || ||||| || |||| || | || ||||| |||
Sbjct 3914710 GGTATTGATCTGGGCACGACCTACAGCTGTGTCGGAGTTTTCCAGCACGGCAAAGTAGAA 3914769
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
|| ||||||||||| || |||||| |||| || ||||| |||||| | ||||| || ||
Sbjct 3914770 ATCATTGCCAATGACCAGGGTAACCGAACCACACCATCGTATGTTGCCTTCACTGACACG 3914829
Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACCAATACT 550174
|| | | | |||| ||||| || || | || |||| || || || ||||| ||
Sbjct 3914830 GAGCGTCTGATTGGCGATGCTGCCAAGAACCAGGTGGCCA-TG--AACCCGACCAACACG 3914886
Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234
|| || ||||| |||||| | ||||| | | ||| | ||| | | | ||||| ||
Sbjct 3914887 ATCTTCGATGCCAAACGTCTGATTGGCCGCAAGTTTGACGATCCCGCCATCCAGGCCGAC 3914946
Query 550235 ATGAAGCATTGGCCTTTC 550252
|||||||| ||||| |||
Sbjct 3914947 ATGAAGCACTGGCCGTTC 3914964
>seq46
Length=4259651
Score = 87.8 bits (96), Expect = 1e-11
Identities = 124/172 (72%), Gaps = 2/172 (1%)
Strand=Plus/Plus
Query 930657 GTATTAATTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGT 930716
||| || |||| || || || || ||| | || || ||||||||| ||||||||||||||
Sbjct 3520173 GTAATAGTTGACTTCTCGTCGCCCAATGTGGCTAAGGAAATGCATGTTGGACATTTGCGT 3520232
Query 930717 TCTACCATTATTGGAGAATCTTTATGTAGATTATATGAATATTGT-GGAAGTAAAGTTCA 930775
|| ||||| |||||||| || | ||| |||| || | |||| || | | || |
Sbjct 3520233 TCGACCATAATTGGAGATTCGATTTGTCGATT-CCTGGAGTTTGTGGGGCATGATGTACT 3520291
Query 930776 TCGAGTCAATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCT 930827
||| | || || || || || ||||| || || || || ||| | ||||||
Sbjct 3520292 TCGTATTAACCACATCGGAGACTGGGGCACGCAGTTCGGCATGCTGATTGCT 3520343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029260144302220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |