Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq657 114 2e-20 >seq657 Length=9220809 Score = 114 bits (126), Expect = 2e-20 Identities = 186/263 (71%), Gaps = 6/263 (2%) Strand=Plus/Minus Query 197023 AGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCG 197082 |||||||||||| ||| || ||||||||||| || || | | ||| || ||| ||| Sbjct 7724377 AGATCCTCGTCGGAAAACCCGGTACCGATCTTGCAGATTGTCTGATACTCCTCGTTCTCG 7724318 Query 197083 GGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTC--CCACCCCGT 197140 | |||||||||||| | ||| | ||||| || || || | ||||| | ||||| Sbjct 7724317 TCGTCGTAACAGGCGAGCAGAAAACCACCGTACGTGCCGGTACGCTTTCCACGTCCCCGA 7724258 Query 197141 TGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCT 197200 | | || ||||| || |||| ||| || | |||| || || || || ||||||| Sbjct 7724257 T--AACCACCGATCACAACCAAATCGAGCGAATCGCCTACGCCGGACAGATAGTCTTTCT 7724200 Query 197201 TCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGT-CCAGG 197259 |||| || | |||| | | || | || || |||||||| ||||| | ||| |||| Sbjct 7724199 TCAGCTTCAACCAGTTGCGGGACCGTTTTGCGATCTCGTACGTTGC-CTCGCGTGCCAGC 7724141 Query 197260 GTCTTGATCATCAATCCCTCGCA 197282 || || | |||||||||||| || Sbjct 7724140 GTTTTCACCATCAATCCCTCACA 7724118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676723864716640