Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq646 118 8e-22
seq1 98.7 8e-16
>seq646
Length=9740529
Score = 118 bits (130), Expect = 8e-22
Identities = 166/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597
|||| || | || || | ||||| ||| || || ||| || ||||| ||||| || |
Sbjct 6802128 CGCCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGG 6802069
Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657
| || | ||| |||| |||| ||||||||||||||| ||||| ||||| ||||||| |
Sbjct 6802068 ACAGTGTGCGACCGTCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCG 6802009
Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717
| | ||||||||| || ||||| || ||| | | | || || | ||| |
Sbjct 6802008 GGATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGA 6801949
Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|||| | ||||| ||||| ||||| | ||||| || || ||||||||| ||
Sbjct 6801948 CCTCAAGGGTAATGGTTTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 6801896
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||||| ||| || || || || ||||| ||||| || || ||| | |||
Sbjct 9473335 AGTCGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGA 9473276
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||| ||||| || || || ||||| ||||||| ||| | || |||
Sbjct 9473275 CCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCTTCC 9473216
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
|| || |||||| || ||| | | | || || | ||| ||||| | ||
Sbjct 9473215 TTATCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTG 9473156
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || || | ||||| || |||||||||||
Sbjct 9473155 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 9473118
>seq1
Length=31626230
Score = 98.7 bits (108), Expect = 8e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||| || || || ||||| || || ||| | || |||| |||| |||||||||||| ||
Sbjct 27268620 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCTTCCAGCTGCTTACCGGCGAA 27268561
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
||||| ||||| ||||| | |||| |||||||||||| ||||| || ||
Sbjct 27268560 GATCAGACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTT 27268501
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | | || |||| ||| ||||||| ||| || || || || |||| || || ||
Sbjct 27268500 CTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCAC 27268441
Query 48755 AAAAATCTGCAT 48766
|| ||||||||
Sbjct 27268440 GAAGATCTGCAT 27268429
Score = 95.1 bits (104), Expect = 9e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||| || || || ||||| || || ||| | || | || |||| |||||||||||| ||
Sbjct 27268392 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCCAGCTGCTTACCGGCGAA 27268333
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
||||| ||||| ||||| | |||| |||||||||||| ||||| || ||
Sbjct 27268332 GATCAGACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTT 27268273
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | | || |||| ||| ||||||| ||| || || || || |||| || || ||
Sbjct 27268272 CTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCAC 27268213
Query 48755 AAAAATCTGCAT 48766
|| ||||||||
Sbjct 27268212 GAAGATCTGCAT 27268201
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||| ||| || || || || ||||| || ||||| || ||| | || | || |||
Sbjct 15287646 ACCAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCCGACAGAGTGCGGCCATCCTCC 15287587
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| || || || ||||| ||||| ||||| | || | ||||||||||| |
Sbjct 15287586 AGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGA 15287527
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || || | | | || || | ||||||||| | || ||||| |||
Sbjct 15287526 ATCTTGGCCTTAACGTTCTCGATGGTATCGGAAGGCTCCACCTCAAGGGTGATCGTCTTT 15287467
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||| || || || || ||||||||
Sbjct 15287466 CCAGTCAGGGTCTTGACGAAGATCTGCAT 15287438
Score = 82.4 bits (90), Expect = 6e-11
Identities = 160/233 (69%), Gaps = 10/233 (4%)
Strand=Plus/Minus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGT-GCTCTCTTTTTGAATATTGTAATCAG 48597
||| ||| | || || | ||||| ||| | ||| | || | | || |||||||||||||
Sbjct 15285021 GCCACCCTTAAGTCGGAGCACCAGATGCATCGTTGATC-CGTGCTGGATATTGTAATCAG 15284963
Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657
||| | ||| | || |||||||| || |||||||| || | ||||| || || | |
Sbjct 15284962 ATATGATCCGACCCTCATCCAACTGTTTGCCGGCAAAGATAATACGCTGCTGGTCGGGTG 15284903
Query 48658 GAACGCCCTCCTTGTCGCTAAT----CTTTTGTTTTACAGAACCCACAGACTCTGACGCC 48713
|| ||||| || | || ||||| | | || |||| | ||| || ||
Sbjct 15284902 CAATACCCTCGCGTTCCATGATTTTATTTTTGATGTCCAAAACC----GTCTCCGAGGCG 15284847
Query 48714 TCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
| | || | || |||||||| ||||| || ||||||||||| ||||||||
Sbjct 15284846 ACAGCATCAAGGGTGATCGTTTTACCCGTTAACGTTTTTACAAAGATCTGCAT 15284794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380934452264994
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |