Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq113 176 8e-39 seq112 127 4e-24 seq556 96.9 6e-15 >seq113 Length=1764599 Score = 176 bits (194), Expect = 8e-39 Identities = 768/1186 (65%), Gaps = 72/1186 (6%) Strand=Plus/Minus Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960 || ||| |||| || | |||||| || || || ||||| | | | ||||| ||| || Sbjct 1503966 AGATGATGGTTCACCACCTGGAACTCGCCCGATAGCACACGTCGATTGTAAACGTTCGAC 1503907 Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020 ||||| ||||||| ||| ||||| |||| ||| || || || || || ||||| Sbjct 1503906 GTGTACGGCTCGAAAGACTCATTGTTGCCCAAAATTTGCGCCGTCGAAGCGGTCGGCATC 1503847 Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCC 213080 || |||| ||| || || | | ||||||| |||| ||||| ||| Sbjct 1503846 GGGGCCAACAGTAGCGAATTACGAATGCCGTGCTTTGCGATCTTCTCTTTCAGCTCAGCC 1503787 Query 213081 CAGTCCCATCTGCCAGACAGGTCC-TCG--TCCTTCACGTTCCACATGTCAAACTGCAAG 213137 |||| ||| || ||| ||| |||||| |||||||| || | ||||| Sbjct 1503786 CAGTTCCAA---------AGATCCGTCGGTTCCTTC---TTCCACATCTCGTATTGCAAA 1503739 Query 213138 ATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTG--GCCA 213195 |||||||||||||| || || || || | ||| || || | | | || |||| Sbjct 1503738 ATGCCTTTGCTCACCGGACTTCCTGCATATGTCTCGTACGGACCTTCC--CGTGCTGCCA 1503681 Query 213196 GCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCT 213255 ||||||| || | ||| || | ||||| |||| ||||||||| | || |||| Sbjct 1503680 ACTCGCAGCTAGCTTCCAGCGCCCCATAGTAAATGGATTCAAATATTTGTTGATTCAGCT 1503621 Query 213256 TCTTGGCCTCTGGGGA--CGT---GA-AGGGCATCATCATGCGTTGGAACACATCAGCCA 213309 | | |||||| | ||| || || |||||| ||| || |||| |||| Sbjct 1503620 TTTGTGCCTCTTCGCTTTCGTATGGATAGCGCATCAAAATG------AATGCATCGGCCA 1503567 Query 213310 GCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACT---CCT 213366 ||||| || ||||| |||||||| || || | || || ||||||| || | | Sbjct 1503566 TGCCCTGCACACCGATACCGATGGGCCTATGGCGCA---TA---TTGGAGCGCTTTGCTT 1503513 Query 213367 CC---AAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGG 213423 || | || || ||||| ||||||||| ||||| || ||||| || | | |||| Sbjct 1503512 CCGGTACCGGATAGTAGTTGATGTCGATGATTTTGTTCAGATTGCGCGTAACGATCTTGG 1503453 Query 213424 TGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTC---CTGCACAAACTCAG 213480 ||||| ||| | | | || |||| || ||| || || ||| Sbjct 1503452 CGACATCCTTCAGCTTCGCA------AAGTCGTATGTCCTGTCAGCCTTTACGAACATGT 1503399 Query 213481 GCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGA 213540 ||| || || |||||| |||||||| || | ||| | | ||||||| | Sbjct 1503398 TCAGTGCAATCGAGGCCAGATTGCAAACCGCAATCTCATCTTTCGACGAATACTCCACAA 1503339 Query 213541 TCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGT 213600 | |||||||||| |||| ||| ||||| || | |||||| ||||| | ||| || Sbjct 1503338 TTTCGGTGCACAAGTTGGAGCACTTAATGGTTCCAACGTTCTGTTGGTT-GCTTTTACGA 1503280 Query 213601 TGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATC 213659 | ||| | ||||||||| ||||| || || || || || | ||| || | | ||| Sbjct 1503279 TTGCATGCATCCTTGTACAGCATATACGGTACGCCCGTTTCCACCTGCGATTCAATGATC 1503220 Query 213660 TGGCTCCAGAGGTACCTG-GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTA 213718 | ||| | | | || ||||| ||| || | | ||| | | | ||||| Sbjct 1503219 GCGAACCACAAAT-CTTGCGCCTTCACCTGTCGAATAA-AGCGTCCCTCTTTT--TCGTA 1503164 Query 213719 -CTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCA-GACCCTGTCCAGTCCCGGACAGGAT 213776 | | | ||| ||| | ||| || | |||||| | ||| ||| ||| ||||| || Sbjct 1503163 ACCGGT-GTACAGCGTCTCGAACTCTTCGCCCCAAGTTTCTG-CCAATCCGGGACA--AT 1503108 Query 213777 -GCG-GGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCC 213833 | | |||||||| |||||||| ||| | |||| || | || ||||||||||||| Sbjct 1503107 CGTGAGGACACATCAGGCTCCACATTTCGTTCGCCTCT-ACCCGCTTCATGAACAGGTCC 1503049 Query 213834 GGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTG 213893 || | |||||| ||| ||||| ||| | | | | ||| ||| || | ||| || Sbjct 1503048 GGTATCCACAGTGCGTAGAACATGTCGCGTGCACGCACCTCCTCCTTGCCGGTGTTCTTC 1502989 Query 213894 CGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCG 213953 ||||| ||||| || || | || ||||||| || || | ||| |||||||| || Sbjct 1502988 TTTAGATCCAGAAACTCGAATACATCGCCGTGCCATGGTTCGAGGTATATGGCAAAAGCT 1502929 Query 213954 CCCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGG 214010 ||||||| | ||||| ||||||||||| || ||| ||||| | | |||||| Sbjct 1502928 CCCGGCCGTTTGTTGCCACCCTGGTCCACATACCGAGCCGTATTGTTGTACACGCGCAGC 1502869 Query 214011 ACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACG 214056 | ||||||| ||||| || ||||| || || | || |||| Sbjct 1502868 ATTGGTACCAATCCGTTCGAAATCCCGTTCGTACCGGAGATGTACG 1502823 >seq112 Length=21277816 Score = 127 bits (140), Expect = 4e-24 Identities = 277/414 (67%), Gaps = 3/414 (1%) Strand=Plus/Plus Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||||| |||| || ||| |||| ||||| | ||||| || | |||||| || | Sbjct 19493133 CAGCAAACGATCGGCCACGAACTCAATGTACTGCGACATCAGTTCGCAGTTCATACCGAG 19493192 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 | || |||| ||||| || | ||| || | ||| ||| || || || | | Sbjct 19493193 CATATCGACCGGCAGGGCCTTCGTCAAAAATTCTTGCTCGATCACAACCGCATCACGGAT 19493252 Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 || | | | || || || || ||||| | ||| | |||| | | || ||| Sbjct 19493253 GATGTCCGTCACCCGCTCCTTGGAAGGTTTCTGCACCAGATACTTGA---ACATCAGGCA 19493309 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 ||||||||| | ||||| |||||||| || || ||| |||| |||||| || || Sbjct 19493310 GGCAAAGTCACAGTGCAGTCCTTCGTCGCGTGAAATCAGCTCGTTCGAGAAGGTCAGTCC 19493369 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 ||||| | || | || || ||||||||||| || || || || ||||||||| Sbjct 19493370 CGGCATAAGGCCTCGCTTCTTTAGCCAGAAAATGGCGGCAAAGCTACCGCTGAAGAAGAT 19493429 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 || || || ||||| ||||| || | || || || || |||||| ||||| Sbjct 19493430 TCCTTCGACAGCCGCAAACGCTACGACACGTTCGCCAAAGTTTGCCTTCTTGCTCGAGAT 19493489 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 |||| || |||||||||||||||||||| | ||| |||| ||| || ||||| Sbjct 19493490 CCAGTTCAGTGCCCAGTCTGCCTTCTTCTTCACGCACGGCAACGTTTCAATGGC 19493543 Score = 98.7 bits (108), Expect = 2e-15 Identities = 164/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 48421 TGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGC 48480 || ||||||||| ||||||||| || || || || || |||||||| ||| | || Sbjct 19493685 TGAGTACATCTCGCTGTGCACATTTTCCATCGCTATTTGAAACCCGTAAAAGCAGCGTGC 19493744 Query 48481 CTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATC 48540 ||| ||||| || || | ||| | ||||| ||| || || || || || ||||| Sbjct 19493745 CTCCGTTACCTGTACCTCCTGGCTGAAGCGCTCCACCAGGTTTTCGTTAACGATACCATC 19493804 Query 48541 TGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC 48600 || || |||||||||||||| || || | |||||| || ||| | | | || | Sbjct 19493805 GGATGCGGCAAAGAAGGCAAGCACGTGCGAGATGAAATGACGTTCGCTCGGTTTCAGCGA 19493864 Query 48601 ATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657 | ||| ||| | ||| ||| || || || |||||||| ||||| ||||| || Sbjct 19493865 TTCCCAATCCTTCATGTCCTTGGAGAGATCGACCTCTTCCACGGTCCAAAAGGAAGC 19493921 >seq556 Length=10313149 Score = 96.9 bits (106), Expect = 6e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 241508 TCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGG 241567 ||||| ||| | |||||||||||| || ||||||||||| |||| ||| |||| ||| Sbjct 7197312 TCCTCGAGCTTGGAGATGCGTTCCAGCTTCCGCCGGCGGCACTTGGAGGCGGCCACCCGG 7197371 Query 241568 TTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGG 241623 || || | | ||| |||||| ||||||||| ||||| |||||||||||||| Sbjct 7197372 TTTCGCAACCGCTTCCGTTCCAGCTTGATGCGCTCCTGCGATTCCATGTCGATCGG 7197427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931524905259520