Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq113 170 4e-37
seq112 120 6e-22
>seq113
Length=1764599
Score = 170 bits (188), Expect = 4e-37
Identities = 503/771 (65%), Gaps = 22/771 (3%)
Strand=Plus/Minus
Query 221510 TCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCC-GC 221568
||||||| ||||| || ||||||||||||||||| || | | | ||||| ||| ||
Sbjct 1503573 TCGGCCATGCCCTGCACACCGATACCGATGGGCCTATGGCGCATATTGGA-GCGCTTTGC 1503515
Query 221569 TTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTT 221628
||| || || ||||| |||||| |||||| | ||||| || || | || | || ||
Sbjct 1503514 TTCCGGTACCGGATAGTAGTTGATGTCGATGATTTTGTTCAGATTGCGCGTAACGATCTT 1503455
Query 221629 AACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTC 221688
| || || |||||||| | || ||| ||| || | ||
Sbjct 1503454 GGCGACATCCTTCAGCTTCG------------CAAAGTCGTAT--GTCCTGTCAGCCTTT 1503409
Query 221689 CACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGT 221748
|| || ||| || |||| |||||| || || || || | ||| || || |
Sbjct 1503408 -ACGAACATGTTCAGTGCAATCGAGGCCAGATTGCAAACCGCAATCTCATCTTTCGACGA 1503350
Query 221749 ATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATT 221808
||||| | || || || || | |||| |||||| ||||| || | || | || ||
Sbjct 1503349 ATACTCCACAATTTCGGTGCACAAGTTGGAGCACTTAATGGTTCCAACGTTCTGTTGGTT 1503290
Query 221809 AGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGC 221868
|| |||||| || |||||||| |||||| | || |||| || |||| ||| |
Sbjct 1503289 GCTTTTACGATTGCATGCATCCTTGTACAGCATATACGGTACGCCCGTTTCCACCTGCGA 1503230
Query 221869 CACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGT 221928
| | ||| | ||| | ||| || ||||| | | || | | | || |
Sbjct 1503229 TTCAATGATCGCGAACCACAAATCTTGCGCCTTCACC----TGTCGAATAAAGCGTCCCT 1503174
Query 221929 CTTTT-CATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTG 221987
||||| | || ||||| || ||| | || |||| ||| || | | || ||| || |
Sbjct 1503173 CTTTTTCGTAACCGGTGTACAGCGTCTCGAACTCTTCGCCCCAAGTTTCTGCCAATCCGG 1503114
Query 221988 GACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGA 222047
|||| | ||||||||||| ||||| | ||| | | |||| || |||||| |
Sbjct 1503113 GACAATCGTGAGGACACATCAGGCTCCACATTTCGTTCGCCTCTACCCGCTTCATGAACA 1503054
Query 222048 GGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGT 222107
||||||| |||||||| || | || | || | | ||| ||||||| |||| |||
Sbjct 1503053 GGTCCGGTATCCACAGTGCGTAGAACATGTCGCGTGCACGCACCTCCTCCTTGCCGGTGT 1502994
Query 222108 TTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCA 222167
| ||| | ||||||| |||||| || | || ||||||| || || || || | ||| |
Sbjct 1502993 TCTTCTTTAGATCCAGAAACTCGAATACATCGCCGTGCCATGGTTCGAGGTATATGGCAA 1502934
Query 222168 GAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGC 222227
||| || || || |||||||||||||| ||||| || || | |||| | | ||
Sbjct 1502933 AAGCTCCCGGCCGTTTGTTGCCACCCTGGTCCACATACCGAGCCGTATTGTTGTACACGC 1502874
Query 222228 GAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACG 222278
| || | ||||||| |||||| || ||||| || || |||||||
Sbjct 1502873 GCAGCATTGGTACCAATCCGTTCGAAATCCCGTTCGTACCGGAGATGTACG 1502823
>seq112
Length=21277816
Score = 120 bits (132), Expect = 6e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 25819 AAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAG 25878
|||| |||||| ||||| |||| |||||| ||| ||| || | ||||||||
Sbjct 19493519 AAGAAGAAGGCAGACTGGGCACTGAACTGGATCTCGAGCAAGAAGGCAAACTTTGGCGAA 19493460
Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938
|| | ||||| ||||| ||||| || || ||||| ||||||||| ||||| |||||
Sbjct 19493459 CGTGTCGTAGCGTTTGCGGCTGTCGAAGGAATCTTCTTCAGCGGTAGCTTTGCCGCCATT 19493400
Query 25939 TTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGC 25998
|||||||| ||| || || ||||| || ||| ||| || |||||||| ||
Sbjct 19493399 TTCTGGCTAAAGAAGCGAGGCCTTATGCCGGGACTGACCTTCTCGAACGAGCTGATTTCA 19493340
Query 25999 AGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034
| ||||| || || ||| | || ||||||||||||
Sbjct 19493339 CGCGACGAAGGACTGCACTGTGACTTTGCCTGCCTG 19493304
Score = 91.5 bits (100), Expect = 3e-13
Identities = 157/226 (69%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTA--CGCTCTATCCA 25570
||||||| |||||| | ||||| ||||||||||| | | ||| | |||| | ||
Sbjct 19493912 TGGACCGTGGAAGAGGTCGATCTCTCCAAGGACATGAAGGATTGGGAATCGCTGAAACCG 19493853
Query 25571 AAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAG 25630
| ||| | ||||| || | ||||| | || |||||||| || || |||||||| |
Sbjct 19493852 AG--CGAACGTCATTTCATCTCGCACGTGCTTGCCTTCTTTGCCGCATCCGATGGTATCG 19493795
Query 25631 TGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTT 25690
| ||||| || ||| ||| | |||| | ||| || ||| |||||| || |
Sbjct 19493794 TTAACGAAAACCTGGTGGAGCGCTTCAGCCAGGAGGTACAGGTAACGGAGGCACGCTGCT 19493735
Query 25691 TCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736
| ||||| || || || || || |||||||||||| ||| ||||
Sbjct 19493734 TTTACGGGTTTCAAATAGCGATGGAAAATGTGCACAGCGAGATGTA 19493689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928836928040320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |