Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq113 170 4e-37 seq112 120 6e-22 >seq113 Length=1764599 Score = 170 bits (188), Expect = 4e-37 Identities = 503/771 (65%), Gaps = 22/771 (3%) Strand=Plus/Minus Query 221510 TCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCC-GC 221568 ||||||| ||||| || ||||||||||||||||| || | | | ||||| ||| || Sbjct 1503573 TCGGCCATGCCCTGCACACCGATACCGATGGGCCTATGGCGCATATTGGA-GCGCTTTGC 1503515 Query 221569 TTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTT 221628 ||| || || ||||| |||||| |||||| | ||||| || || | || | || || Sbjct 1503514 TTCCGGTACCGGATAGTAGTTGATGTCGATGATTTTGTTCAGATTGCGCGTAACGATCTT 1503455 Query 221629 AACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTC 221688 | || || |||||||| | || ||| ||| || | || Sbjct 1503454 GGCGACATCCTTCAGCTTCG------------CAAAGTCGTAT--GTCCTGTCAGCCTTT 1503409 Query 221689 CACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGT 221748 || || ||| || |||| |||||| || || || || | ||| || || | Sbjct 1503408 -ACGAACATGTTCAGTGCAATCGAGGCCAGATTGCAAACCGCAATCTCATCTTTCGACGA 1503350 Query 221749 ATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATT 221808 ||||| | || || || || | |||| |||||| ||||| || | || | || || Sbjct 1503349 ATACTCCACAATTTCGGTGCACAAGTTGGAGCACTTAATGGTTCCAACGTTCTGTTGGTT 1503290 Query 221809 AGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGC 221868 || |||||| || |||||||| |||||| | || |||| || |||| ||| | Sbjct 1503289 GCTTTTACGATTGCATGCATCCTTGTACAGCATATACGGTACGCCCGTTTCCACCTGCGA 1503230 Query 221869 CACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGT 221928 | | ||| | ||| | ||| || ||||| | | || | | | || | Sbjct 1503229 TTCAATGATCGCGAACCACAAATCTTGCGCCTTCACC----TGTCGAATAAAGCGTCCCT 1503174 Query 221929 CTTTT-CATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTG 221987 ||||| | || ||||| || ||| | || |||| ||| || | | || ||| || | Sbjct 1503173 CTTTTTCGTAACCGGTGTACAGCGTCTCGAACTCTTCGCCCCAAGTTTCTGCCAATCCGG 1503114 Query 221988 GACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGA 222047 |||| | ||||||||||| ||||| | ||| | | |||| || |||||| | Sbjct 1503113 GACAATCGTGAGGACACATCAGGCTCCACATTTCGTTCGCCTCTACCCGCTTCATGAACA 1503054 Query 222048 GGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGT 222107 ||||||| |||||||| || | || | || | | ||| ||||||| |||| ||| Sbjct 1503053 GGTCCGGTATCCACAGTGCGTAGAACATGTCGCGTGCACGCACCTCCTCCTTGCCGGTGT 1502994 Query 222108 TTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCA 222167 | ||| | ||||||| |||||| || | || ||||||| || || || || | ||| | Sbjct 1502993 TCTTCTTTAGATCCAGAAACTCGAATACATCGCCGTGCCATGGTTCGAGGTATATGGCAA 1502934 Query 222168 GAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGC 222227 ||| || || || |||||||||||||| ||||| || || | |||| | | || Sbjct 1502933 AAGCTCCCGGCCGTTTGTTGCCACCCTGGTCCACATACCGAGCCGTATTGTTGTACACGC 1502874 Query 222228 GAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACG 222278 | || | ||||||| |||||| || ||||| || || ||||||| Sbjct 1502873 GCAGCATTGGTACCAATCCGTTCGAAATCCCGTTCGTACCGGAGATGTACG 1502823 >seq112 Length=21277816 Score = 120 bits (132), Expect = 6e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 25819 AAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAG 25878 |||| |||||| ||||| |||| |||||| ||| ||| || | |||||||| Sbjct 19493519 AAGAAGAAGGCAGACTGGGCACTGAACTGGATCTCGAGCAAGAAGGCAAACTTTGGCGAA 19493460 Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938 || | ||||| ||||| ||||| || || ||||| ||||||||| ||||| ||||| Sbjct 19493459 CGTGTCGTAGCGTTTGCGGCTGTCGAAGGAATCTTCTTCAGCGGTAGCTTTGCCGCCATT 19493400 Query 25939 TTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGC 25998 |||||||| ||| || || ||||| || ||| ||| || |||||||| || Sbjct 19493399 TTCTGGCTAAAGAAGCGAGGCCTTATGCCGGGACTGACCTTCTCGAACGAGCTGATTTCA 19493340 Query 25999 AGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034 | ||||| || || ||| | || |||||||||||| Sbjct 19493339 CGCGACGAAGGACTGCACTGTGACTTTGCCTGCCTG 19493304 Score = 91.5 bits (100), Expect = 3e-13 Identities = 157/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTA--CGCTCTATCCA 25570 ||||||| |||||| | ||||| ||||||||||| | | ||| | |||| | || Sbjct 19493912 TGGACCGTGGAAGAGGTCGATCTCTCCAAGGACATGAAGGATTGGGAATCGCTGAAACCG 19493853 Query 25571 AAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAG 25630 | ||| | ||||| || | ||||| | || |||||||| || || |||||||| | Sbjct 19493852 AG--CGAACGTCATTTCATCTCGCACGTGCTTGCCTTCTTTGCCGCATCCGATGGTATCG 19493795 Query 25631 TGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTT 25690 | ||||| || ||| ||| | |||| | ||| || ||| |||||| || | Sbjct 19493794 TTAACGAAAACCTGGTGGAGCGCTTCAGCCAGGAGGTACAGGTAACGGAGGCACGCTGCT 19493735 Query 25691 TCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736 | ||||| || || || || || |||||||||||| ||| |||| Sbjct 19493734 TTTACGGGTTTCAAATAGCGATGGAAAATGTGCACAGCGAGATGTA 19493689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928836928040320