Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 187 2e-41 >seq1 Length=31626230 Score = 187 bits (206), Expect = 2e-41 Identities = 376/553 (68%), Gaps = 10/553 (2%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||| ||||||||||| | || || || ||||| ||||| | |||| || | || ||| Sbjct 3914704 GCAGTTGGTATTGATCTGGGCACGACCTACAGCTGTGTCGGAGTTTTCCAGCACGGCAAA 3914763 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 |||||||| |||||||||||||| ||||| |||| |||||||| |||||| | || ||| Sbjct 3914764 GTAGAAATCATTGCCAATGACCAGGGTAACCGAACCACACCATCGTATGTTGCCTTCACT 3914823 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || || | ||| ||||| |||||||| || | || | || || || || Sbjct 3914824 GACACGGAGCGTCTGATTGGCGATGCTGCCAAGAACCAGGTGGCCATGAACCCGACCAAC 3914883 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || || || ||||| ||| | ||||||| || || ||||| ||| || | |||| | Sbjct 3914884 ACGATCTTCGATGCCAAACGTCTGATTGGCCGCAAGTTTGACGATCCCGCCATCCAGGCC 3914943 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG-- 474626 || ||| || ||||| || ||||| | | || |||||| | || | | Sbjct 3914944 GACATGAAGCACTGGCCGTTCGAGGTGGAGTCGATCGAGGGCAAACCAAAGATTGCGGTC 3915003 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 | |||| | || || | ||| || | |||||| | | ||| ||||| | Sbjct 3915004 GAGTACAAG--GGCGAGAAGAAATCGTTCTTCCCGGAAGAGGTCAGTTCGATGGTGCTGA 3915061 Query 474687 CCAAAATGAAACAAACCGC--GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAA 474743 |||| ||||| |||| || |||| | | ||| ||||| || || | || || | Sbjct 3915062 CCAAGATGAAGGAAACGGCCGAAGCTTA---CCTGGGCAAGACGGTGACGAACGCCGTCA 3915118 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 |||| || ||||| || || || ||||| || || || ||||| || ||||| || | | Sbjct 3915119 TTACCGTGCCAGCCTACTTCAACGATTCGCAGCGCCAGGCAACGAAGGATGCCGGTACCA 3915178 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 || | || | || || | ||||| || || || || || || ||||| | || || | Sbjct 3915179 TTTCCGGATTGAACGTGCTGCGTATCATCAACGAGCCGACCGCGGCCGCCATCGCCTACG 3915238 Query 474864 GTCTTGATAAGAA 474876 |||| |||||||| Sbjct 3915239 GTCTGGATAAGAA 3915251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268150117290344