Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq24 178 2e-39 >seq24 Length=5879236 Score = 178 bits (196), Expect = 2e-39 Identities = 374/556 (67%), Gaps = 4/556 (1%) Strand=Plus/Plus Query 47752 GATTCCTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCA 47811 |||| ||| ||||||| || || || | | || ||||||||||| ||||| || Sbjct 3063173 GATTTCTCTACAAACTCCCGCACGGAGTGCGTTTCCCCGGTGGCAATAACGAAATCTTCT 3063232 Query 47812 GGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAG 47871 || | || || || | ||| | |||||| || ||||| || ||| |||| || |||||| Sbjct 3063233 GGCTTGTCCTGCTGCATCATGAGCCACATCGCTTCGACGTAGTCTTTGGCGTGGCCCCAG 3063292 Query 47872 TCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCT 47931 ||||| | ||||||||| || || | | | || |||| || || ||| || Sbjct 3063293 TCACGCTTGGAATCAAGATTACCCAGCTCGAGGTACTCCTGCTGTCCG--AGCGATATCT 3063350 Query 47932 TTT--AATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCAT 47989 | | | | || || || || || |||||| |||| || || | || || || | Sbjct 3063351 TCGCCACCGAGCGGGTTATTTTGCGTGTGACAAAATTTTCTCCCCGGCGCGGTGACTCGT 3063410 Query 47990 GATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTA 48049 ||||||| ||||| ||| | ||||| |||| |||| | ||| |||||||| | || | Sbjct 3063411 GATTAAAGAGAATCCCATTGCAGGCGAACATATCGTACGCTTCGCGATAGTTTATCACAA 3063470 Query 48050 TCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCT 48109 ||||||| || || | || ||| | || || || ||||||||||| ||||| ||| Sbjct 3063471 TCCAGTAACCGTACATCTTGGCACAGGCGTACGGGGAGCGTGGATAGAACGGTGTCTTCT 3063530 Query 48110 CTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGATAC 48169 | |||| || ||||| |||||| || || || || ||||||||||| |||| | Sbjct 3063531 CGTTCTGCGGTGTCTCGGCCACCTTTCCGTACAGCTCCGACGTGGATGCTTGGTAGAAGC 3063590 Query 48170 GAACCCTATCTTCCATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAGGGTGCCTATGG 48229 | ||| | | ||| | | | ||| | ||| || |||| | || || || | | Sbjct 3063591 GGACCGTCTTCTCCTGTCCGACCGTACGAATTGCATCCAGCAGACGTAGCGTACCGACCG 3063650 Query 48230 CATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGACTCTGTGCCC 48289 ||||| || | || || ||| || || ||||| | ||| || || || || || Sbjct 3063651 CATCTACCTCGGCCGTGTATTCGCTCAAATCGAACGATATCTTGACGTGGCTTTGGGCGG 3063710 Query 48290 CAAGATTATAAATCTC 48305 | ||||| ||||| || Sbjct 3063711 CCAGATTGTAAATTTC 3063726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665488759934960