Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq113 129 7e-25 seq24 129 7e-25 >seq113 Length=1764599 Score = 129 bits (142), Expect = 7e-25 Identities = 452/700 (65%), Gaps = 13/700 (2%) Strand=Plus/Plus Query 75894 AATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGA 75953 |||| ||| ||| || || ||| |||||||| ||||||||||| || || || | Sbjct 1503228 AATCGCAGGTGGAAACGGGCGTACCGTATATGCTGTACAAGGATGCATGCAATCGTAAAA 1503287 Query 75954 GTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGT 76013 | |||||| |||| | ||||| || ||| |||| || | ||||| |||||| | |||| Sbjct 1503288 GCAACCAACAGAACGTTGGAACCATTAAGTGCTCCAACTTGTGCACCGAAATTGTGGAGT 1503347 Query 76014 ACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATG 76073 | | || ||||||| || ||||||||| |||| || || || || | || | Sbjct 1503348 ATTCGTCGAAAGATGAGATTGCGGTTTGCAATCTGGCCTCGATTGCACTGAACATGTTCG 1503407 Query 76074 TCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTA 76133 | || | || | | || | || | || || || | || || | ||||| |||| Sbjct 1503408 TAAAGGCTGACA---GGACATACGACTTTGCGAAGCTGAAGGATGTCGCCAAGATCGTTA 1503464 Query 76134 CCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAG- 76192 | ||||| ||| | |||| |||| || | ||||| || | || |||| Sbjct 1503465 CGCGCAATCTGAACAAAATCATCGACATCAACTACTATCCGGTACCGGAAGC---AAAGC 1503521 Query 76193 --TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTA 76250 || |||||||| || || || || ||| | ||||| || || | || |||| ||| | Sbjct 1503522 GCTCCAATATGCGCCATAGGCCCATCGGTATCGGTGTGCAGGGCATGGCCGATGCATTCA 1503581 Query 76251 TTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTG 76310 ||||| ||||| ||| || || || || | || ||||| | || |||| Sbjct 1503582 TTTTGATGCGCTATCCATACGAAAGCGAAGAGGCACAAAAGCTGAATCAACAAATATTTG 1503641 Query 76311 AAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCT 76370 || |||| || | | | ||||| || || || || ||||| | | ||||| | | Sbjct 1503642 AATCCATTTACTATGGGGCGCTGGAAGCTAGCTGCGAGTTGGCAGCACGGGAAGGTCCGT 1503701 Query 76371 ATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAG 76430 | ||||||| || || ||| | | | |||| | | || | || |||| ||||| Sbjct 1503702 ACGAGACATATGCAGGAAGTCCGGTGAGCAAAGGCATTTTGCAATACGAGATGT-GGAAG 1503760 Query 76431 GTGAAACCAAGCTCAACTACG--ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGG 76488 | |||| | | | || | |||||| || || || || ||| || | || Sbjct 1503761 AAGGAACCGA-CGGATCTTTGGAACTGGGCTGAGCTGAAAGAGAAGATCGCAAAGCACGG 1503819 Query 76489 TCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 76548 ||||||| || || |||| || ||||| || || || || || ||||| ||||| Sbjct 1503820 CATTCGTAATTCGCTACTGTTGGCCCCGATGCCGACCGCTTCGACGGCGCAAATTTTGGG 1503879 Query 76549 TAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 || ||||| | || || || ||||| | ||| | ||| Sbjct 1503880 CAACAATGAGTCTTTCGAGCCGTACACGTCGAACGTTTAC 1503919 >seq24 Length=5879236 Score = 129 bits (142), Expect = 7e-25 Identities = 281/414 (68%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618 || ||||||| || ||| ||||| || ||||| || || | ||| | || || | || Sbjct 3063179 TCTACAAACTCCCGCACGGAGTGCGTTTCCCCGGTGGCAATAACGAAATCTTCTGGCTTG 3063238 Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTC-- 177676 || || || | |||||||||||| ||||| || ||||| ||||| || |||||||| | Sbjct 3063239 TCCTGCTGCATCATGAGCCACATCGCTTCGACGTAGTCTTTGGCGTGGCCCCAGTCACGC 3063298 Query 177677 -TGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTG 177735 ||| | | || ||||| || || ||| |||| || || | || | || | Sbjct 3063299 TTGGAA---TCAAGATTACCCAGCTCGAGGTACTCCTGCTGTCC--GAGCGATATCTTCG 3063353 Query 177736 ACGCC-ATC-AGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGT 177793 | || | | || || || ||||||||| | | || || | |||||| ||||| | Sbjct 3063354 CCACCGAGCGGGTTATTTTGCGTGTGACAAAATTTTCTCCCCGGCGCGGTGACTCGTGAT 3063413 Query 177794 TGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCC 177853 | ||||| || || |||||| ||||| | || | ||| || || ||| | || | || Sbjct 3063414 TAAAGAGAATCCCATTGCAGGCGAACATATCGTACGCTTCGCGATAGTTTATCACAATCC 3063473 Query 177854 AGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAG 177913 ||| | || || |||| | | || ||| ||||| ||||| ||||||| ||| Sbjct 3063474 AGTAACCGTACATCTTGGCACAGGCGTACGGGGAGCGTGGATAGAACGGTGTCTTCTC-- 3063531 Query 177914 TTTGTGGAGTTTCTCGG--ACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 || || || |||||| || || || ||| |||||| || || |||||||| Sbjct 3063532 GTTCTGCGGTGTCTCGGCCACCTTTCCGTACAGCTCCGACGTGGATGCTTGGTA 3063585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596564544072640