Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq231 138 1e-26
seq35 118 1e-20
seq112 105 8e-17
seq586 87.8 2e-11
>seq231
Length=3502
Score = 138 bits (152), Expect = 1e-26
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| || ||| || || ||||||||||| ||||||| ||
Sbjct 2853 GCTTGGCCAGCTCACCGGGCAGGAGCAGACGGACAGCGGTCTGGATTTCGCGCGATGTGA 2794
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
|||| ||||||||| |||||||||| ||| ||||| | | ||||| |||| |
Sbjct 2793 TCGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGATGCCTCCGCAGCAATGCGTTCGAAAA 2734
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
| ||||| ||||| |||||||| ||| | ||| |||||||| ||| ||||
Sbjct 2733 TATCGTTCACAAAGCTGTTCATGATGCTCATAGCCTTCGACGAGATGCCAGTGTCCGGGT 2674
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
|||| ||||| |||||||||||||||
Sbjct 2673 GCACTTGCTTCAGCACCTTGTAGATG 2648
>seq35
Length=5844712
Score = 118 bits (130), Expect = 1e-20
Identities = 142/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 1592108 AAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCACC 1592167
|||||||||||||||||| ||||||| || || | || || ||| |||
Sbjct 1216302 AAGCGCACCGACGACATCAGTTCGTGGGATGCTGATTTCCTGAAGGTGGACCAGGGCACG 1216361
Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227
|| || || | ||||| || || ||||| | ||||||||| |||| | ||| | |
Sbjct 1216362 CTGTTCGAACTCATCCTGGCGGCAAACTATTTGGACATCAAGGGTCTGTTGGATGTGACG 1216421
Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287
|||||| | ||||| ||||||||||||||||| | || || ||||| |||||||| ||
Sbjct 1216422 TGCAAGACGGTGGCAAACATGATCAAGGGCAAAACCCCGGAAGAGATTCGCAAGACGTTC 1216481
Query 1592288 AACATCAAGTACG 1592300
||||||||| |||
Sbjct 1216482 AACATCAAGAACG 1216494
>seq112
Length=21277816
Score = 105 bits (116), Expect = 8e-17
Identities = 156/221 (71%), Gaps = 9/221 (4%)
Strand=Plus/Plus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
||||||||||| |||| ||||| |||| || || ||||| ||||| ||||||
Sbjct 19493329 CCTTCGTCGCGTGAAATCAGCTCGTTCGAGAAGGTCAGTCCCGGCATAAGGCCTCGCTTC 19493388
Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299
|| ||||| || |||||| || || || ||| ||||| || ||||| || |||||
Sbjct 19493389 TTTAGCCAGAAAATGGCGGCAAAGCTACCGCTGAAGAAGATTCCTTCGACAGCCGCAAAC 19493448
Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACTTCATCGCC 869356
| | || || ||| ||||| | ||| |||| | |||||| |||| |||
Sbjct 19493449 GCTACGACACGTTCGCCAAAGTT------TGCCTTCTTGCTCGAGATCCAGTTCAGTGCC 19493502
Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGC 869397
||||| ||||| ||| |||| |||||| ||| || |||||
Sbjct 19493503 CAGTCTGCCTTCTTCTTCACGCACGGCAACGTTTCAATGGC 19493543
>seq586
Length=1106
Score = 87.8 bits (96), Expect = 2e-11
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||| || || ||| | ||| || ||||| || ||||| ||||| | ||
Sbjct 706 GCTTGGCCAACTCACCAGGCAACAGCAGACGGACGGCCGTTTGGATTTCGCGGGACGTGA 647
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
|||| |||||||| ||||||||| ||| || |||| ||||||| |||| |
Sbjct 646 TCGTCGAACGCTTGTTGTAGTGCGCCAAGCGGGATGCTTCGGCAGCGATGCGCTCGAAAA 587
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || || |||||||| ||||| |||| || || || || || |
Sbjct 586 TGTCGTTCACGAAGCTGTTCATGATGCTCATCGCCTTGGAAGAAATTCCGGTATCCGGAT 527
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| || || || | |||||||||||||
Sbjct 526 GGACTTGTTTCAACACCTTGTAGATG 501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107083560144926
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |