Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq334 138 9e-28 seq646 82.4 6e-11 >seq334 Length=15145372 Score = 138 bits (152), Expect = 9e-28 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497 |||| || ||||| || || || ||||| || |||||||| ||||| || | || ||| Sbjct 2557510 TCGAATTGAGTTTGTGCTCCAAGTTCGCAACCAAAGTACTTCGTCGGATAGGTTGCAGGA 2557451 Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557 || |||| ||| ||| | |||| |||||| ||||| || || || ||||||||||| Sbjct 2557450 CGACCAATCGCGCGGGCCACCTCGGCCATGTTCACGATCACCGTTTTAATGCCGTTGCCT 2557391 Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACA 34617 || || || ||||| || |||||| ||||| ||||| |||||||| || | |||| Sbjct 2557390 TTACCCTCTACCTTAGCATTGATGCGAGGCATCTTGTAACGGTAGAAGATATCGGTCACA 2557331 Query 34618 TTGCGGTTAACGTTCACAGTCCCCAT 34643 ||||| || ||||| || || |||| Sbjct 2557330 TTGCGATTCACGTTTACGGTAGCCAT 2557305 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||| ||||| || | ||||| ||||| | ||| || | | || | |||||| | Sbjct 2557834 CGGTGGGTTCTTGATGATGAACGTGTTCACCTTGTGGTTTACCTCCAGAGGACCGTGAAA 2557775 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 |||||| || ||||| ||||| |||| | ||| || | || || || | || || Sbjct 2557774 ACCGCACGCCTTGCAACCCTGCGAGATGGTACCCTTCTTCGATGATACTATCAAATCCGT 2557715 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 |||||| ||||| |||||||| |||| ||| ||||||||||| ||||| || | ||| || Sbjct 2557714 CTCCGGATTGTCGCATTCCGGGCACAGCACGAACTTGCGGATAAAACCGTCCAACAGATC 2557655 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| | || | ||||| ||||| || || ||||| ||||| || Sbjct 2557654 CTGCAGTTTGGTAGCATCGTGCGAGCCATTCACAATGAAGCGTTCATT 2557607 >seq646 Length=9740529 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 110267 TTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG 110326 || || ||||| || || |||||||| | || || |||||||||||| | || ||| Sbjct 6801894 TTCAAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAAACCATTACCCTTGAGGTCGAG 6801953 Query 110327 CCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386 || ||||| ||| | || || |||||| || || || ||| | || | Sbjct 6801954 CCCTCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCGCCG 6802013 Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446 ||||| || | || || | ||| ||||| ||||||||||| | | ||| || | || Sbjct 6802014 GATCAGCAGCGTCTGATCTTTGCCGGTAAGCAGCTGGAGGACGGTCGCACACTGTCCGAC 6802073 Query 110447 TACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||| || || || || | || ||||| | | ||||| || || Sbjct 6802074 TACAACATTCAGAAGGAGTCGACCCTTCATCTGGTGCTTCGCCTGCGCGGTGG 6802126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412838188638254