Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq231 174 2e-37 seq586 123 4e-22 seq68 114 2e-19 seq35 102 1e-15 seq112 96.9 5e-14 >seq231 Length=3502 Score = 174 bits (192), Expect = 2e-37 Identities = 183/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||||||||| ||||| || || ||||||||| ||||||| || ||| ||| Sbjct 2892 TGTACTTGGTGACGGCCTTCGTACCTTCGGACACGGCGTGCTTGGCCAGCTCACCGGGCA 2833 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||| || || ||||||||||| ||||| | |||||| ||||||||| | Sbjct 2832 GGAGCAGACGGACAGCGGTCTGGATTTCGCGCGATGTGATCGTCGAGCGCTTGTTGTAGT 2773 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||||||| ||||| | | ||||| |||| || ||||| ||||| ||||| Sbjct 2772 GCGCCAGGCGGGATGCCTCCGCAGCAATGCGTTCGAAAATATCGTTCACAAAGCTGTTCA 2713 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | || |||||||| ||| |||||||| ||||| |||||||||| Sbjct 2712 TGATGCTCATAGCCTTCGACGAGATGCCAGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 2653 Query 1485710 A 1485710 | Sbjct 2652 A 2652 >seq586 Length=1106 Score = 123 bits (136), Expect = 4e-22 Identities = 172/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||| || || || || ||||||||| |||||| || || ||| Sbjct 745 TGTACTTGGTGACAGCCTTCGTGCCTTCGGACACGGCGTGCTTGGCCAACTCACCAGGCA 686 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| || ||||| || ||||| ||||||| |||||| |||||||| | Sbjct 685 ACAGCAGACGGACGGCCGTTTGGATTTCGCGGGACGTGATCGTCGAACGCTTGTTGTAGT 626 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| |||| || |||| ||||||| |||| |||||||| || || ||||| Sbjct 625 GCGCCAAGCGGGATGCTTCGGCAGCGATGCGCTCGAAAATGTCGTTCACGAAGCTGTTCA 566 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| ||| || || || || || || || || || | |||||||| Sbjct 565 TGATGCTCATCGCCTTGGAAGAAATTCCGGTATCCGGATGGACTTGTTTCAACACCTTGT 506 Query 1485710 A 1485710 | Sbjct 505 A 505 >seq68 Length=3930384 Score = 114 bits (126), Expect = 2e-19 Identities = 172/242 (71%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| || || |||||||||||||| || ||||| ||| | ||||| || || ||| Sbjct 2243713 TGTACTTCGTCACTGCCTTGGTACCCTCGGACACGGCATGCTTTGCCAGCTCACCCGGCA 2243772 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || || || ||||||||||| |||| ||||||| ||||||||| Sbjct 2243773 ACAGTAGCCGTACCGCCGTCTGGATCTCCCGGGACGTGATCGTGGAGCGCTTGTTGTAAT 2243832 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGAC-AAACGAGTTC 1485648 | |||| ||| || || | | || || |||| || ||||| || |||| | ||| Sbjct 2243833 GGGCCAACCGGGACGCTTCCGCCGCAATCCGCTCGAAGATATCGTTCACGAAACTA-TTC 2243891 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||| | || || ||||| ||||||||| |||||||| ||||| ||| Sbjct 2243892 ATGATGCTCATGGCCTTCGACGAAATGCCGGTGTCGGGGTGGACCTGCTTCAGCACTTTG 2243951 Query 1485709 TA 1485710 || Sbjct 2243952 TA 2243953 >seq35 Length=5844712 Score = 102 bits (112), Expect = 1e-15 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || ||||||||||||||||| ||||||| | || |||| ||||| | Sbjct 1216299 GAAAAGCGCACCGACGACATCAGTTCGTGGGATGCTGATTTCCTGAAGGTGGACCAGGGC 1216358 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 || || || || | ||||| || || ||||| | ||||||||| || | ||| || Sbjct 1216359 ACGCTGTTCGAACTCATCCTGGCGGCAAACTATTTGGACATCAAGGGTCTGTTGGATGTG 1216418 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 ||||||||| ||||| ||| | ||||||||||| | || || || || |||||||| Sbjct 1216419 ACGTGCAAGACGGTGGCAAACATGATCAAGGGCAAAACCCCGGAAGAGATTCGCAAGACG 1216478 Query 2035746 TTTAACATCAAGTACG 2035761 || ||||||||| ||| Sbjct 1216479 TTCAACATCAAGAACG 1216494 >seq112 Length=21277816 Score = 96.9 bits (106), Expect = 5e-14 Identities = 155/220 (70%), Gaps = 7/220 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||||||||| |||| ||||| ||| || || ||||| ||||| |||||| Sbjct 19493329 CCTTCGTCGCGTGAAATCAGCTCGTTCGAGAAGGTCAGTCCCGGCATAAGGCCTCGCTTC 19493388 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| || ||||| || || || ||| ||||| || ||||| || ||||| Sbjct 19493389 TTTAGCCAGAAAATGGCGGCAAAGCTACCGCTGAAGAAGATTCCTTCGACAGCCGCAAAC 19493448 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT--TGTTGATCCACTTCATCGCCC 794518 | |||| || || || ||||| | ||| |||| | |||||| |||| |||| Sbjct 19493449 GCTACGACACGTTC-GCCAAAGTTT----GCCTTCTTGCTCGAGATCCAGTTCAGTGCCC 19493503 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558 | |||||||| ||| |||| | |||| ||| || ||||| Sbjct 19493504 AGTCTGCCTTCTTCTTCACGCACGGCAACGTTTCAATGGC 19493543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916174278047642