Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq646 100 2e-16 seq112 95.1 1e-14 >seq646 Length=9740529 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 107548 GGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGG 107607 |||| || ||||| || || |||||||| | || || |||||||||||| | || | Sbjct 6801892 GGTTCAAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAAACCATTACCCTTGAGGTCG 6801951 Query 107608 AGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCG 107667 || | ||||| ||| | || || ||||| ||||| || ||| | || Sbjct 6801952 AGCCCTCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCGC 6802011 Query 107668 TGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGG 107727 |||||||||| | || || | ||| ||||| ||||||||||||| ||| || | | Sbjct 6802012 CGGATCAGCAGCGTCTGATCTTTGCCGGTAAGCAGCTGGAGGACGGTCGCACACTGTCCG 6802071 Query 107728 ACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||||||||||| |||||||| || | || ||||| Sbjct 6802072 ACTACAACATTCAGAAGGAGTCGACCCTTCATCTGGTG 6802109 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| || ||||| | || ||||| ||||| || | || ||| || Sbjct 9473118 ATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCG 9473177 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || |||||| ||||| ||||| | ||| ||||||| Sbjct 9473178 GACACGATCGAAAATGTGAAGGCAAAGATCCAGGATAAGGAAGGAATCCCCCCGGATCAG 9473237 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||||||||||| | || || ||||||||||| Sbjct 9473238 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTGTCGGACTACAAC 9473297 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAA 107785 ||||| ||||| ||||| | || ||||| || || | || || || || Sbjct 9473298 ATTCAGAAGGAATCTACCCTCCATCTGGTGCTGCGACTCCGTGGTGGTAA 9473347 >seq112 Length=21277816 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/153 (75%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 103857 AGGATTGGCCCCGGAGTC--TGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTA 103914 |||||||||| | ||| |||| || || ||| | || || ||| ||||| |||| Sbjct 3898516 AGGATTGGCC--GACGTCATTGAAGCAAAAGCCGAAACAGTTGAGCGACGCCGGCTTCTT 3898573 Query 103915 CTACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTG 103974 |||||||||| | ||||| ||| |||||| ||||| ||||| |||||||| || Sbjct 3898574 CTACACCGGCAAGAGCGATCGGGTGAAGTGCTTCAGCTGCGGTGGTGGCCTAAAGGACTG 3898633 Query 103975 GGAGCACGATGATGAGCCGTGGCAACAACACGC 104007 ||| || || |||||||||||| | || ||||| Sbjct 3898634 GGAACAGGACGATGAGCCGTGGGAGCAGCACGC 3898666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398873504031142