Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1 118 8e-21 seq646 86.0 5e-11 >seq1 Length=31626230 Score = 118 bits (130), Expect = 8e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 ||||| | ||||| ||||| || || || ||||| || || | || | || | ||| Sbjct 3914912 CCAATCAGACGTTTGGCATCGAAGATCGTGTTGGTCGGGTTCATGGCCACCTGGTTCTTG 3914853 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 || ||||| ||||||||| | || || || || || | |||||| ||||| || || || Sbjct 3914852 GCAGCATCGCCAATCAGACGCTCCGTGTCAGTGAAGGCAACATACGATGGTGTGGTTCGG 3914793 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 ||||| || ||||| ||||| ||||| ||||| || | || | || || ||||| || Sbjct 3914792 TTACCCTGGTCATTGGCAATGATTTCTACTTTGCCGTGCTGGAAAACTCCGACACAGCTG 3914733 Query 282851 AAAGTTGTTCCTAAATCAATACCAA 282875 | || || || | ||||||||||| Sbjct 3914732 TAGGTCGTGCCCAGATCAATACCAA 3914708 >seq646 Length=9740529 Score = 86.0 bits (94), Expect = 5e-11 Identities = 87/111 (78%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| |||||||||||| | || || ||||||||||||||||||||| | || || ||| Sbjct 9164290 GGTAAGGAAGGTCGTATTCGTGGTAACTTGATGGGAAAGCGTGTCGATTTTTCGGCCCGT 9164231 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTC-TCAATGAAGTTGGTGTTCC 432397 || || ||||| | ||||| ||| ||| | || || | || ||||| || Sbjct 9164230 ACCGTCATTACGCCCGATCCGAAT-CTGCGCATCGATCAGGTCGGTGTACC 9164181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740597113065228