Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq112 96.9 3e-15 seq113 84.2 2e-11 seq646 82.4 7e-11 >seq112 Length=21277816 Score = 96.9 bits (106), Expect = 3e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 50217 CCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGACTaaaaacaaaaaa-CTTAC 50275 ||||| ||| || |||| || |||||| |||| |||| | ||| || | || Sbjct 19493528 CCGTGCGTGAAGAAGAAGGCAGACTGGGCACTGAACTGGATCTCGAGCAAGAAGGCAAAC 19493469 Query 50276 TTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTT 50335 |||||| |||||| | || |||||||| || ||||| | || || ||||||||| Sbjct 19493468 TTTGGC-GAACGTGTCGTAGCGTTTGCGGCTGTCGAAGGAATCTTCTTCAGCGGTAGCTT 19493410 Query 50336 TGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGA 50395 ||| ||||| || | | || | |||| | ||||| || || || || ||||| Sbjct 19493409 TGCCGCCATTTTCTGGCTAAAGAAGCGAGGCCTTATGCCGGGACTGACCTTCTCGAACGA 19493350 Query 50396 GTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTG 50437 | ||||||| |||||||||||| ||||| |||||||| || Sbjct 19493349 GCTGATTTCACGCGACGAAGGACTGCACTGTGACTTTGCCTG 19493308 >seq113 Length=1764599 Score = 84.2 bits (92), Expect = 2e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 150404 GTGCGAAAATAGTACATGCCGGTTTTGAGGCCGCGCTTCCAACCGTACATGTGCACCGAC 150463 ||||| |||||||||||||| || || || || |||||| ||||| | || | |||| Sbjct 1504266 GTGCGCAAATAGTACATGCCCGTCTTCAGTCCCATCTTCCAGCCGTAGAAATGGATCGAC 1504207 Query 150464 GCCATTTTAGGCAAAGTAGGGTTTG-CCATGTACACGTTGAACGATTGACTTTGATCGAT 150522 | || || | || ||| || | | ||| || | |||||||||||| |||||||| Sbjct 1504206 GTCAGCTT-GCCATAGTTCGGCTCGGCCACGTGTATGTTGAACGATTGTGACTGATCGAT 1504148 Query 150523 AAATGCTCCCCTGTCTGCTGCCATTTCAAT 150552 |||||| || | || || ||||||| ||| Sbjct 1504147 AAATGCCCCGCGATCGGCAGCCATTTTAAT 1504118 >seq646 Length=9740529 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||| || | ||| | |||||||| || || |||||||| || || |||| Sbjct 9473332 CGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGACCA 9473273 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 || || || || || || || |||| ||||| |||||||| || || || ||||| || Sbjct 9473272 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCTTCCTTA 9473213 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || || ||| || | | ||| | |||||| | || || || |||| || | Sbjct 9473212 TCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 9473153 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||||||||||| | ||||| ||||| || ||||| Sbjct 9473152 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 9473118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488539859589600