Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq112 96.9 3e-15
seq113 84.2 2e-11
seq646 82.4 7e-11
>seq112
Length=21277816
Score = 96.9 bits (106), Expect = 3e-15
Identities = 156/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 50217 CCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGACTaaaaacaaaaaa-CTTAC 50275
||||| ||| || |||| || |||||| |||| |||| | ||| || | ||
Sbjct 19493528 CCGTGCGTGAAGAAGAAGGCAGACTGGGCACTGAACTGGATCTCGAGCAAGAAGGCAAAC 19493469
Query 50276 TTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTT 50335
|||||| |||||| | || |||||||| || ||||| | || || |||||||||
Sbjct 19493468 TTTGGC-GAACGTGTCGTAGCGTTTGCGGCTGTCGAAGGAATCTTCTTCAGCGGTAGCTT 19493410
Query 50336 TGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGA 50395
||| ||||| || | | || | |||| | ||||| || || || || |||||
Sbjct 19493409 TGCCGCCATTTTCTGGCTAAAGAAGCGAGGCCTTATGCCGGGACTGACCTTCTCGAACGA 19493350
Query 50396 GTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTG 50437
| ||||||| |||||||||||| ||||| |||||||| ||
Sbjct 19493349 GCTGATTTCACGCGACGAAGGACTGCACTGTGACTTTGCCTG 19493308
>seq113
Length=1764599
Score = 84.2 bits (92), Expect = 2e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 150404 GTGCGAAAATAGTACATGCCGGTTTTGAGGCCGCGCTTCCAACCGTACATGTGCACCGAC 150463
||||| |||||||||||||| || || || || |||||| ||||| | || | ||||
Sbjct 1504266 GTGCGCAAATAGTACATGCCCGTCTTCAGTCCCATCTTCCAGCCGTAGAAATGGATCGAC 1504207
Query 150464 GCCATTTTAGGCAAAGTAGGGTTTG-CCATGTACACGTTGAACGATTGACTTTGATCGAT 150522
| || || | || ||| || | | ||| || | |||||||||||| ||||||||
Sbjct 1504206 GTCAGCTT-GCCATAGTTCGGCTCGGCCACGTGTATGTTGAACGATTGTGACTGATCGAT 1504148
Query 150523 AAATGCTCCCCTGTCTGCTGCCATTTCAAT 150552
|||||| || | || || ||||||| |||
Sbjct 1504147 AAATGCCCCGCGATCGGCAGCCATTTTAAT 1504118
>seq646
Length=9740529
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256
|||| || | ||| | |||||||| || || |||||||| || || ||||
Sbjct 9473332 CGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGACCA 9473273
Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316
|| || || || || || || |||| ||||| |||||||| || || || ||||| ||
Sbjct 9473272 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCTTCCTTA 9473213
Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376
|| || ||| || | | ||| | |||||| | || || || |||| || |
Sbjct 9473212 TCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 9473153
Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
||||||||||| | ||||| ||||| || |||||
Sbjct 9473152 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 9473118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488539859589600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |