Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq646 138 2e-27
seq1 134 3e-26
seq112 113 9e-20
>seq646
Length=9740529
Score = 138 bits (152), Expect = 2e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
||||| || | || || |||||||| ||||| || || || || || ||| | | |||
Sbjct 9473332 CGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGACCA 9473273
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || || || ||||| || | || ||||| || || ||||||||||||
Sbjct 9473272 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCTTCCTTA 9473213
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || |||||||| || |||||||| ||||| || ||| || || || | || ||
Sbjct 9473212 TCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 9473153
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814
|||||||| || | ||| || || || |||||||| |||
Sbjct 9473152 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGATT 9473114
>seq1
Length=31626230
Score = 134 bits (148), Expect = 3e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
||||||| | || ||| || || ||||||| || || || ||||| || || || || |
Sbjct 27268429 TACCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGG 27268370
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | || ||||| || || || || || ||||| || | || ||||||||||
Sbjct 27268369 ACAGAGTGCGTCCATCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAG 27268310
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || ||||| || || ||||| || || || || || ||||| || || || |
Sbjct 27268309 GAATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGA 27268250
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| || || |||||||| |||| |||||| || || ||||||||
Sbjct 27268249 CCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268201
Score = 131 bits (144), Expect = 3e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | || ||| || || ||||||| || || || ||||| || || || || ||
Sbjct 27268655 CCCCCGCGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 27268596
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | |||||||| || || || || || ||||| || | || |||||||||||
Sbjct 27268595 AGAGTGCGTCCGTCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGA 27268536
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || || ||||| || || || || || ||||| || || || ||
Sbjct 27268535 ATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACC 27268476
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || |||||||| |||| |||||| || || ||||||||
Sbjct 27268475 TCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268429
>seq112
Length=21277816
Score = 113 bits (124), Expect = 9e-20
Identities = 203/294 (69%), Gaps = 2/294 (1%)
Strand=Plus/Plus
Query 198312 CTCGAAAAGGCGGAAACACATGACCCTCTATGGAATGCATCGCAAATACAGATGATAAGA 198371
|| |||| ||| |||| || ||| ||| ||||| | | || | |||||| |
Sbjct 19215514 CTGGAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGCAG 19215573
Query 198372 GAAGGAAAAATGCATAGTTTTTTAAGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 198431
|| || |||||||| | ||| | | ||||||||||| || |||||||| || ||||||
Sbjct 19215574 GAGGGCAAAATGCACGGCTTTCTGCGGATGTACTGGGCCAAGAAGATACTGGAGTGGACA 19215633
Query 198432 AGAACACCGGAAGACGC-TTTGAGTTATAGTATCTATCTAAACAATAAGTACGAACTAGA 198490
| |||||| || || || | ||| || | |||||||| ||| || |||| || ||
Sbjct 19215634 AAAACACCCGACGAAGCGCTCGAGATAGCG-ATCTATCTGAACGATCGGTACAGCCTGGA 19215692
Query 198491 CGGCACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACATGATCG 198550
|| ||||| ||||| ||||| || || |||||||| || || |||| ||||
Sbjct 19215693 TGGGCGCGATCCGAACGGGTACGTCGGGTGCATGTGGTCGATCGCGGGCATACACGATCA 19215752
Query 198551 AGCGTGGAAAGAAAGACCTATATTTGGGAAGATAAGATATATGAATTATGAGGG 198604
| ||||| || | || || || || || || || ||||| ||||||||
Sbjct 19215753 GGGATGGAAGGAGCGCGAAATTTTCGGCAAAATCAGGTACATGAACTATGAGGG 19215806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981818670989842
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |