Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq112 114 2e-20 >seq112 Length=21277816 Score = 114 bits (126), Expect = 2e-20 Identities = 202/292 (69%), Gaps = 2/292 (1%) Strand=Plus/Plus Query 182995 CTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGA 183054 || |||| ||| |||| || ||| ||| ||||| | | || | |||||| || Sbjct 19215514 CTGGAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGCAG 19215573 Query 183055 GAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 183114 || || |||||||| | ||| | || ||||||||||| || |||||||| || |||||| Sbjct 19215574 GAGGGCAAAATGCACGGCTTTCTGCGGATGTACTGGGCCAAGAAGATACTGGAGTGGACA 19215633 Query 183115 AGAACTCCGGAAGATGC-TTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGA 183173 | ||| || || || || | ||| || | |||||| ||||| || |||| || || Sbjct 19215634 AAAACACCCGACGAAGCGCTCGAGATAGCG-ATCTATCTGAACGATCGGTACAGCCTGGA 19215692 Query 183174 CGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAG 183233 || ||||| ||||| ||||| || || |||||||| || || |||||||| Sbjct 19215693 TGGGCGCGATCCGAACGGGTACGTCGGGTGCATGTGGTCGATCGCGGGCATACACGATCA 19215752 Query 183234 AGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGAG 183285 | ||||| || | || || || || || || || ||||| |||||| Sbjct 19215753 GGGATGGAAGGAGCGCGAAATTTTCGGCAAAATCAGGTACATGAACTATGAG 19215804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903403543590080