Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq113 342 5e-89 seq646 134 1e-26 seq112 125 7e-24 seq1 107 2e-18 >seq113 Length=1764599 Score = 342 bits (378), Expect = 5e-89 Identities = 1144/1758 (65%), Gaps = 47/1758 (3%) Strand=Plus/Minus Query 147943 CGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGT 148002 ||| ||| ||||||| |||||||||||||||||| || ||||| ||| ||||| | Sbjct 1504273 CGGCTTG-GTGCGCAAATAGTACATGCCCGTCTTCAGTCCCATCTTCCAGCCGTAGAAAT 1504215 Query 148003 GCACCGACGACATGAGCGTG---TACGTCGGGTGCGGCACAAACAGATTAAACGACTGGC 148059 | | ||||| || || || || |||| | | ||| | || ||||| || Sbjct 1504214 GGATCGACGTCA---GCTTGCCATAGTTCGGCTCGGCCACGTGTATGTTGAACGATTGTG 1504158 Query 148060 TCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCATCT 148119 ||| || || || || || || || || ||||||| |||| |||| | |||| Sbjct 1504157 ACTGATCGATAAATGCCCCGCGATCGGCAGCCATTTTAATGCACGTTTTTACCGAAATCT 1504098 Query 148120 CCCAGGCCGTCTTGTACAGC-CGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACC 148178 |||| |||| ||||| || ||| ||| | | ||||| || ||| ||| | Sbjct 1504097 CCCACACCGTTTTGTAGAGGTCGCG-GATCTCCTGCGGAATCGATTCAATGTTCTGAATG 1504039 Query 148179 GAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCG---TCCGTGTATAGGTTGAGCTCG 148235 || || | | ||||| | || ||| ||| ||| ||||| | | | Sbjct 1504038 GAACCATTATTAGACAAAATGTTGTTCTTCATATCGAGATCCC---ATAGGCCCATCGCA 1503982 Query 148236 ATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGC 148295 |||| || | | |||| || ||||||||||| |||||||| | ||||| || || Sbjct 1503981 GTCAGATCTTGCAGTAGATGATGGTTCACCACCTGGAACTCGCCCGATAGCACACGTCGA 1503922 Query 148296 AGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTC 148355 || ||||| ||| |||| || || ||||| |||||||||||||| ||||| ||| Sbjct 1503921 TTGTAAACGTTCGACGTGTACGGCTCGAAAGACTCATTGTTGCCCAAAATTTGCGCCGTC 1503862 Query 148356 GTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTG 148415 | || || ||||| || | ||| ||||| || || | ||| | ||| || || Sbjct 1503861 GAAGCGGTCGGCATCGGGGCCAACAGTAGCGAATTACGAATGCCGTGCTTTGCGATCTTC 1503802 Query 148416 CGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGC 148475 ||||| | ||||||| ||| || || |||| | |||||||| ||||| ||| Sbjct 1503801 TCTTTCAGCTCAGCCCAGTTCCAAAGATCCGTCGGTTCCTTCTTCCACATCTCGTATTGC 1503742 Query 148476 AGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCC 148535 | |||||| ||| | || || || | || | |||||| || | | || ||| Sbjct 1503741 AAAATGCCTTTGCTCACCGGACTTCCTGCATATGTCTCGTACGGACCTTCCCGTGCTGCC 1503682 Query 148536 AGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGC 148595 | |||||||| || || ||||| || |||||||| | || ||||| || ||| Sbjct 1503681 AACTCGCAGCTAGCTTCCAGCGCCCCATAGTAAATGGATTCAAATATTTGTTGATTCAGC 1503622 Query 148596 AGCGCCGCCGACTCGCTTTCGTACGGCATA-CGCAGCCGCACAAACGCGTCGGCAAGGCC 148654 ||| ||||||||||| || ||| |||| | | || || ||||| | ||| Sbjct 1503621 TTTTGTGCCTCTTCGCTTTCGTATGG-ATAGCGCATCAAAATGAATGCATCGGCCATGCC 1503563 Query 148655 CTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGC-GCGCTCTCG--AG 148711 ||| || || | || ||||||| || || ||||| |||| ||| || | Sbjct 1503562 CTGCACACCGATACCGATGGGCCTATGGCGCATATTGGA---GCGCTTTGCTTCCGGTAC 1503506 Query 148712 CGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTT--TGTAATT 148769 |||||||| |||| ||||||||| |||| ||||||||| || | ||| | || Sbjct 1503505 CGGATAGTAGTTGATGTCGATGATTTTGTTCAGATTGCGCGTAACGATCTTGGCGACATC 1503446 Query 148770 CTGCGCAGCAATTCAAAATCGTA---CTTGTCA---TCTACGATGCATCGGTTCACGGCG 148823 || |||| |||| ||||| | ||||| | ||||| ||| ||||| || Sbjct 1503445 CT--TCAGCTTCGCAAAGTCGTATGTCCTGTCAGCCTTTACGA-ACAT--GTTCAGTGCA 1503391 Query 148824 ATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCG 148883 || ||||| |||||||| || || ||||||| | ||||| || || |||| | Sbjct 1503390 ATCGAGGCCAGATTGCAAACCGCAATCTCATCTTTCGACGAATACTCCACAATTTCGGTG 1503331 Query 148884 CACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCG 148943 |||| ||| ||| || || || ||||||| ||| ||||| || | ||||| || Sbjct 1503330 CACAAGTTGGAGCACTTAATGGTTCCAACGTTCTGTTGGTTGCTTTTACGATTGCATGCA 1503271 Query 148944 TCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGA 149000 |||||||||||||| |||||| |||| ||||||||||||| ||| | || ||||| Sbjct 1503270 TCCTTGTACAGCATATACGGTACGCCCGTTTCCACCTGCGATTCAATGATCGCGAACC-- 1503213 Query 149001 TGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATAC 149060 || || ||||| ||| || | |||| ||||| | ||||| || ||| Sbjct 1503212 -ACAAATCTTGCGCCTTCACCTGTCGAATAAAGCGTCCCTCTTTTTCGTAACCGGTGTAC 1503154 Query 149061 AGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATG 149120 ||| ||||||| | ||||| | || | | ||||| || | ||| || ||||| Sbjct 1503153 AGCGTCTCGAACTCTTCGCCCCAAGTTTCTGCCAATCCGGGACAATCGTGAGGACACATC 1503094 Query 149121 AGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCG 149180 || ||||| ||| ||| | || |||||||| ||||| || || | ||| || ||| Sbjct 1503093 AGGCTCCACATTTCGTTCGCCTCTACCCGCTTCATGAACAGGTCCGGTATCCACAGTGCG 1503034 Query 149181 TACATGAGGTCGCGCGCCTTGCA-GTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCAC 149239 || | | |||||| | | ||| || || ||| |||| || | || | Sbjct 1503033 TAGAACATGTCGCGTG-CACGCACCTCCTCCTTGCCGGTGTTCTTCTTTAGATCCAGAAA 1502975 Query 149240 GCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCG---CTT 149296 ||||| || ||||||| || || | ||| | || | || ||| || || Sbjct 1502974 CTCGAATACATCGCCGTGCCATGGTTCGAGGTATATGGCAAAAGCTCCCGGCCGTTTGTT 1502915 Query 149297 GCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCC 149356 ||| |||||||| || | || || | ||||| |||| || | ||| ||| | | || Sbjct 1502914 GCCACCCTGGTCCACATACCGAGCCGTATTGTTGTACACGCGCAGCATTGGTACCAATCC 1502855 Query 149357 ACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTT 149416 | | | | ||||| ||| | ||| | || ||| || | ||||||||| Sbjct 1502854 GTTCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCACGAATACAGTGCACGTT 1502795 Query 149417 GACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGAT 149476 | || || ||||| | | ||||| || |||||| | ||||| |||||| Sbjct 1502794 CAGCCCAATTCCGCCAGCAGATTTTGAAATCAGCGCGCACTGCTTCAGCGTGTCGTAGAT 1502735 Query 149477 GCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACG 149536 || || || |||||| |||||| |||||||| || || ||| ||||| | Sbjct 1502734 ACCTTCAATACTGTCGTCAGACATGGTTAGCAGAAAACAGGATGACAACTGCGGGCGCTG 1502675 Query 149537 CGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTC 149596 ||| | || ||||||||||| || ||| || ||||| || || || || | Sbjct 1502674 CGTTGCCGCTGCGAACATGGTAGGTGAGGCATGGGTAAAGTAGCGCTCCGACAGCAAATT 1502615 Query 149597 GTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAG 149656 ||| | ||||| | || || || || ||||| || || || || |||||||||| Sbjct 1502614 GTATGTCTCGATGGCTGCATCGATATCTTCACCATGAATACCGATCGCAACGCGCATCAA 1502555 Query 149657 CATATGCTGCGGTCGCTC 149674 ||| ||||||||||| || Sbjct 1502554 CATGTGCTGCGGTCGTTC 1502537 >seq646 Length=9740529 Score = 134 bits (148), Expect = 1e-26 Identities = 155/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| || || ||||| || ||||| || || ||| ||| | ||||| |||| Sbjct 9473321 ATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGACCA-TCCTCCAGCT 9473263 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| | ||||| |||||||| || || ||||| |||||||| || ||||| Sbjct 9473262 GCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCTTCCTTATCCTGGATCT 9473203 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || ||| | | || | |||||| | ||||| || || | |||| ||| ||||||| Sbjct 9473202 TTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGG 9473143 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||||||||| Sbjct 9473142 TGAGCGTTTTCACGAAAATCTGCATG 9473117 >seq112 Length=21277816 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 |||||| |||||||| |||||| || |||||||| || ||||||||||| || || Sbjct 19493304 CAGGCAGGCAAAGTCACAGTGCAGTCCTTCGTCGCGTGAAATCAGCTCGTTCGAGAAGGT 19493363 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 ||| || ||||| | |||| | |||| | |||| |||||||||||||| || || Sbjct 19493364 CAGTCCCGGCATAAGGCCTCGCTTCTTTAGCCAGAAAATGGCGGCAAAGCTACCGCTGAA 19493423 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT 120818 ||| | || || || ||||| || || | || ||| | || | ||| ||||||| Sbjct 19493424 GAAGATTCCTTCGACAGCCGCAAACGCTACGACACGTTCGCCAAAGTTTGCCTTCTTGCT 19493483 Query 120819 GTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCA 120865 |||||| |||| ||||| || ||||| || ||||||||||| Sbjct 19493484 CGAGATCCAGTTCAGTGCCCAGTCTGCCTTCTTCTTCACGCACGGCA 19493530 >seq1 Length=31626230 Score = 107 bits (118), Expect = 2e-18 Identities = 149/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| || || ||||| || || ||||| || ||| | | | ||||| |||| Sbjct 15287641 ATGAAGGGTCGATTCCTTCTGAATGTTATAATCCGACAGAGTGCGGCCA-TCCTCCAGCT 15287583 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| | || || |||||||| || || ||||| || |||||||| |||| Sbjct 15287582 GCTTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGAATCT 15287523 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||| | || |||| |||||||| || | ||||| || || || | Sbjct 15287522 TGGCCTTAACGTTCTCGATGGTATCGGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAG 15287463 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || ||||| ||||||||| Sbjct 15287462 TCAGGGTCTTGACGAAGATCTGCATG 15287437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483416703008720