Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq646 102 5e-17 seq1 84.2 1e-11 >seq646 Length=9740529 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || || | ||||| ||| || || ||| || || |||||||| ||||| Sbjct 6802126 CCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 6802067 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| |||| |||| || || |||||||| |||| |||||||||||| |||| Sbjct 6802066 AGTGTGCGACCGTCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGG 6802007 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || || || || ||| ||| |||| || | || || | || || Sbjct 6802006 ATGCCCTCCTTATCCTGGATCTTCGCCTTC-ACATTCTCGATCGTATCCGAGGGCTCGAC 6801948 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || |||||||| || | ||||| || ||||||||||| Sbjct 6801947 CTCAAGGGTAATGGTTTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 6801900 >seq1 Length=31626230 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | |||| ||| || || || || || ||||| ||||| || Sbjct 15287664 CCACCACGCAGACGAAGGACCAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCCGAC 15287605 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || || || |||| ||||||||||||| | || Sbjct 15287604 AGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGG 15287545 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| ||| || | | ||| | || | ||| ||| | ||||| Sbjct 15287544 ATTCCCTCCTTGTCCTGAATCTT-GGCCTTAACGTTCTCGATGGTATCGGAAGGCTCCAC 15287486 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| |||||||| || || || | || || || ||||||||||| Sbjct 15287485 CTCAAGGGTGATCGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCAT 15287438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328701283877760