Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq646 105 2e-17 seq1 89.7 1e-12 >seq646 Length=9740529 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||||||||| || || || ||||| | || || || ||| ||||| ||||| Sbjct 9473133 AAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCGGACACGATCGAAAAT 9473192 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||| || || || |||||||| ||||| || | || |||||| Sbjct 9473193 GTGAAGGCAAAGATCCAGGATAAGGAAGGAATCCCCCCGGATCAGCAGCGTCTCATCTTC 9473252 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| |||| ||||| | ||| || | || |||||| | ||||| || ||| Sbjct 9473253 GCCGGCAAGCAGCTGGAGGATGGTCGCACTCTGTCGGACTACAACATTCAGAAGGAATCT 9473312 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || || || || |||| || Sbjct 9473313 ACCCTCCATCTGGTGCTGCGACTCCG 9473338 >seq1 Length=31626230 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||||| || || || || ||||| |||| || || || ||||| |||| Sbjct 27268216 AAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCGTCGGACACGATCGAGAAC 27268275 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || ||| || || || | || |||||| Sbjct 27268276 GTGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAGCAGCGTCTGATCTTC 27268335 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| ||||||||||| | ||| || |||| |||||| ||||||| ||||| Sbjct 27268336 GCCGGTAAGCAGCTGGAAGATGGACGCACTCTGTCCGACTACAACATCCAGAAGGAGTCG 27268395 Query 206365 AC 206366 || Sbjct 27268396 AC 27268397 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||||| || || || || ||||| |||| || || || ||||| |||| Sbjct 27268444 AAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCGTCGGACACGATCGAGAAC 27268503 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || ||| || || || | || |||||| Sbjct 27268504 GTGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAGCAGCGTCTGATCTTC 27268563 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| ||||||| ||| | ||| || |||| |||||| ||||||| ||||| Sbjct 27268564 GCCGGTAAGCAGCTGGAAGACGGACGCACTCTGTCCGACTACAACATCCAGAAGGAGTCG 27268623 Query 206365 AC 206366 || Sbjct 27268624 AC 27268625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181810533670438