Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq113 343 1e-89 seq1 107 2e-18 seq646 105 6e-18 seq112 96.9 3e-15 >seq113 Length=1764599 Score = 343 bits (380), Expect = 1e-89 Identities = 1208/1856 (65%), Gaps = 38/1856 (2%) Strand=Plus/Minus Query 146575 GCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCG-CCACGAGTGATT 146633 || || || ||||||||||| ||||||||||| || || || |||| ||| || Sbjct 1504275 GCCGGCTTGGTGCGCAAATAGTACATGCCCGTCTTCAGTCC-CATCTTCCAGCCGTAGAA 1504217 Query 146634 GTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGGCT 146693 || ||||| |||| || | || ||||||| |||||| | || |||||||| Sbjct 1504216 ATGGATCGACGTCAGCTTGCCATAGTTCGGCTCGGCCACGTGTATGTTGAACGATTGTGA 1504157 Query 146694 TTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAAT-CATGCGTTTTGTCTTCATTT 146752 ||||| || || || ||| ||||| ||||| | ||| || | |||| | || | Sbjct 1504156 CTGATCGATAAATGCCCCGCGATCGGCAGCCATTTTAATGCACGT-TTTTACCGAAATCT 1504098 Query 146753 CCCAAGCGGTTTTGTACAGCCC-CTTAACGCTATCTGGAATACCTTCAATGTTTTGAATA 146811 |||| | |||||||| || | | | | | | ||||| ||||||||| ||||| Sbjct 1504097 CCCACACCGTTTTGTAGAGGTCGCGGATCTCCTGC-GGAATCGATTCAATGTTCTGAATG 1504039 Query 146812 GAGCCCTTGTGCGCAAAAATAGTGTTTCGTATTTCGGGCGTGTAAAGGTTTAGTTTAATG 146871 || || || | | ||||| |||| || ||| | | ||| | | | Sbjct 1504038 GAACCATTATTAGACAAAATGTTGTTCTTCATATCGAGATCCCATAGGCCCATCGCAGTC 1503979 Query 146872 AGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA 146931 || || | | || || || || ||||| || |||||||||| |||||||||| Sbjct 1503978 AGATCTTGCAGTAGATGATGGTTCACCACCTGGAACTCGCCCGATAGCACACGTCGATTG 1503919 Query 146932 TACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTT 146991 || || || ||| | ||||| ||||||||||| ||||| || ||||| ||||| | Sbjct 1503918 TAAACGTTCGACGTGTACGGCTCGAAAGACTCATTGTTGCCCAAAATTTGCGCCGTCGAA 1503859 Query 146992 GCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCC 147051 ||||| ||||| |||| || | ||||| || | |||| | ||| || || Sbjct 1503858 GCGGTCGGCATCGGGGCCAACAGTAGCGAATTACGAATGCCGTGCTTTGCGATCTTCTCT 1503799 Query 147052 TTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGC 147111 |||| ||||| ||| | || || | |||||||| ||||| || | Sbjct 1503798 TTCAGCTCAGCCCAGTTCCAAAGATCCGTCGGTTCCTTCTTCCACATCTCGTATTGCAAA 1503739 Query 147112 ACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGC-GCCAA 147170 | ||| || | ||||| || || | || ||| || || || ||| ||||| Sbjct 1503738 ATGCCTTTGCTCACCGGACTTCCTGCATATGTCTCGTACGGACCTTCCCG-TGCTGCCAA 1503680 Query 147171 TTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGAC 147230 || ||||| || || ||||| |||||||| |||| ||| ||||||| || || Sbjct 1503679 CTCGCAGCTAGCTTCCAGCGCCCCATAGTAAATGGATTCAAATATTTGTTGATTCAGCTT 1503620 Query 147231 GGTCGCTTCTTCGCTCTCGTAAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCT 147289 || |||||||| ||||| || ||| |||| | | || |||||||||| |||| Sbjct 1503619 TTGTGCCTCTTCGCTTTCGTATGG-ATAGCGCATCAAAATGAATGCATCGGCCATGCCCT 1503561 Query 147290 GGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGAT 147349 | | ||||| ||||| || | ||| ||| |||||| || || || |||| Sbjct 1503560 GCACACCGATACCGATGGGCCTATGGCGCATATTGGAGCGCTTTGCTTCCGGTACCGGAT 1503501 Query 147350 AGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGA 147409 ||| |||| || || || ||||| || || ||| || | || | | || | Sbjct 1503500 AGTAGTTGATGTCGATGATTTTGTTCAGATTGCGCGTAACGATCTTGGCGACATCCTTCA 1503441 Query 147410 GTTTCTCGAAATCATAAGTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACG 147469 | ||| | || || || |||| ||| | |||| | ||||| || || || | Sbjct 1503440 GCTTCGCAAAGTCGTATGTCCTGTCAGCCTT---TACGAACATGTTCAGTGCAATCGAGG 1503384 Query 147470 CCAGATTGCAGACGGCCGTCTCTTCGG-CGTCGCTGTACTGCACGATTTCGGCGCACAGG 147528 |||||||||| || || |||| || || || |||| ||| ||||||| ||||| | Sbjct 1503383 CCAGATTGCAAACCGCAATCTCATCTTTCGACGAA-TACTCCACAATTTCGGTGCACAAG 1503325 Query 147529 TTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTG 147588 ||| ||| || ||| ||| | || || || |||||||| |||||||| || || ||| Sbjct 1503324 TTGGAGCACTTAATGGTTCCAACGTTCTGTTGGTTGCTTTTACGATTGCATGCATCCTTG 1503265 Query 147589 AAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATA---AACCTATGCAGG 147645 | ||||| |||||| |||| || || || |||| ||||| ||| |||| || Sbjct 1503264 TACAGCATATACGGTACGCCCGTTTCCACCTGCGATTCAATGATCGCGAACCA---CAAA 1503208 Query 147646 TCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTA-CCGCTCGTACAACCG 147704 || ||||| |||| | | | |||| ||||| |||||||| ||| | ||||| | Sbjct 1503207 TCTTGCGCCTTCACCTGTCGAATAAAGCGTCCCTCTTTTTCGTAACCGGT-GTACAGCGT 1503149 Query 147705 CTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGA 147764 ||| ||||| ||||| | || || | |||||||| | || ||||||||||| Sbjct 1503148 CTCGAACTCTTCGCCCCAAGTTTCTGCCAATCCGGGACAATCGTGAGGACACATCAGGCT 1503089 Query 147765 CCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACAT 147824 |||||| |||| ||| | || || ||| ||||| ||||| | |||||| ||||| | Sbjct 1503088 CCACATTTCGTTCGCCTCTACCCGCTTCATGAACAGGTCCGGTATCCACAGTGCGTAGAA 1503029 Query 147825 AAGATCGCGCGCTTTGCA-ATCCTCGGCGCCCATGTTGCGTTTCAAATTAAG-CACGCTA 147882 | ||||| || ||| ||||| ||| |||| || | || || || | | Sbjct 1503028 CATGTCGCGTGC-ACGCACCTCCTCCTTGCCGGTGTTCTTCTTTAGATCCAGAAACTCGA 1502970 Query 147883 TAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACG---CTTTCCG 147939 | | ||| ||||||| ||||| | ||| | ||| | || || || || || Sbjct 1502969 -ATACATCGCCGTGCCATGGTTCGAGGTATATGGCAAAAGCTCCCGGCCGTTTGTTGCCA 1502911 Query 147940 CCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTC 147999 |||||||| |||| || || | ||||| ||||||||| ||| ||| ||| ||| || Sbjct 1502910 CCCTGGTCCACATACCGAGCCGTATTGTTGTACACGCGCAGCATTGGTACCAATCCGTTC 1502851 Query 148000 GCAGTGCCGTTGGT---GGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTA 148056 | | | ||||| || ||| ||| | | || || || | ||||||||| Sbjct 1502850 GAAATCCCGTTCGTACCGGA---GATGTACGTTCCCTTCGCACGAATACAGTGCACGTTC 1502794 Query 148057 ACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATG 148116 | ||||| ||||| | | ||||| || ||||| | || || |||||| Sbjct 1502793 AGCCCAATTCCGCCAGCAGATTTTGAAATCAGCGCGCACTGCTTCAGCGTGTCGTAGATA 1502734 Query 148117 CCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGC 148176 || || || ||||||| | | |||| |||||| || ||| ||||| | || Sbjct 1502733 CCTTCAATACTGTCGTCAGACATGGTTAGCAGAAAACAGGATGACAACTGCGGGCGCTGC 1502674 Query 148177 GTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGA 148236 ||| |||| | ||| | ||| || || || ||||| | | || || Sbjct 1502673 GTTGCCGCTGCGAACATGGTAGGTGAGGCATGGGTAAAGTAGCGCTCCGACAGCAAATTG 1502614 Query 148237 TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGC 148296 || ||||| || || | ||||| || || || ||||| || | ||| |||||||| | | Sbjct 1502613 TATGTCTCGATGGCTGCATCGATATCTTCACCATGAATACCGATCGCAACGCGCATCAAC 1502554 Query 148297 ATGTGCTGTGGTCGTTCGGC-AACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAG 148355 |||||||| |||||||| | | |||| |||||| | ||||| ||| | Sbjct 1502553 ATGTGCTGCGGTCGTTCAACGATCTTG-CCCCGGATCTTCAACAGATAGGATCGTTCCAA 1502495 Query 148356 GGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCGCAT 148411 |||||| | || || || ||||| ||||||| | |||||| ||| |||| || Sbjct 1502494 AGTTTTGAAGCCGAAATAGTTGTATCCAAAATCACGATCGTAAATGATAGCCGAAT 1502439 >seq1 Length=31626230 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | ||||| || | | | ||||| || || |||||||||||| || || Sbjct 27268422 ACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGT 27268363 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||| ||||| ||||||| |||| |||||||| ||||||||||| ||||| Sbjct 27268362 GCGTCCATCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCC 27268303 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || |||| | || | || || | |||||| || || | Sbjct 27268302 CTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAG 27268243 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| | || || |||||||| || || | ||| |||||||| Sbjct 27268242 CGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268201 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || || |||||||||||| || || || ||||| Sbjct 27268637 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCTTCC 27268578 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| ||||||| |||| |||||||| ||||||||||| ||||| || || || Sbjct 27268577 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 27268518 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || |||| | || | || || | |||||| || || | ||| | || || Sbjct 27268517 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTG 27268458 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || | ||| |||||||| Sbjct 27268457 CCAGTCAGCGTCTTCACGAAGATCTGCAT 27268429 >seq646 Length=9740529 Score = 105 bits (116), Expect = 6e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| ||| | |||| ||| | | | ||||| || ||||||||||||||| || || Sbjct 6802120 CGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGTGTG 6802061 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || || || ||||| ||||||| | |||| |||||||| ||||| || || ||||| Sbjct 6802060 CGACCGTCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATGCCC 6802001 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || ||||| || || |||| | || | ||||| | ||||| || || | Sbjct 6802000 TCCTTATCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGG 6801941 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | |||||||| || || ||||| | ||| |||||||| Sbjct 6801940 GTAATGGTTTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 6801900 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||| ||| | | | || || || |||||||||||||| || || || | Sbjct 9473332 CGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGACCA 9473273 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || ||||| || |||| |||| |||||||| ||||| || || || ||||| ||| Sbjct 9473272 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCTTCCTTA 9473213 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||| |||| | ||| | || || | ||||| || || | || | Sbjct 9473212 TCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 9473153 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGA 132125 || || || || || ||||| | |||||||||||||| Sbjct 9473152 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGA 9473116 >seq112 Length=21277816 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 46759 TGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCA 46818 |||| ||||| || ||||| | ||||| |||| |||||| |||| ||| || | Sbjct 19493530 TGCCGTGCGTGAAGAAGAAGGCAGACTGGGCACTGAACTGGATCTCGAGCAAGAAGGCAA 19493471 Query 46819 CGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTT 46878 | | ||| || | || || || ||| |||||||| | || || || || | Sbjct 19493470 ACTTTGGCGAACGTGTCGTAGCGTTTGCGGCTGTCGAAGGAATCTTCTTCAGCGGTAGCT 19493411 Query 46879 TTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACG 46938 ||||||||||||| | | || | |||| | |||||||| ||||| ||| |||| Sbjct 19493410 TTGCCGCCATTTTCTGGCTAAAGAAGCGAGGCCTTATGCCGGGACTGACCTTCTCGAACG 19493351 Query 46939 AGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCT 46984 || |||| || |||||||||||||| ||| |||||||| || || Sbjct 19493350 AGCTGATTTCACGCGACGAAGGACTGCACTGTGACTTTGCCTGCCT 19493305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476607160720080