Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq113 125 6e-24 >seq113 Length=1764599 Score = 125 bits (138), Expect = 6e-24 Identities = 498/776 (64%), Gaps = 21/776 (3%) Strand=Plus/Minus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 || ||||| ||||||| ||| |||| || || || | || |||||||||||||||||| Sbjct 1504299 ACCGTGAACTGGATTGCATTAACGGCCGGCTTGGTGCGCAAATAGTACATGCCCGTCTTC 1504240 Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758 | ||| ||| |||| || ||| || || | || | |||| |||| |||||| Sbjct 1504239 AGTCCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATAGTTCGGCTCGGCC 1504180 Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818 ||| | || | |||||| ||||||||| | | ||||| || || ||||| || Sbjct 1504179 ACGTGTATGTTGAACGATTGTGACTGATCGATAAATGCCCCGCGATCGGCAGCCATTTT- 1504121 Query 136819 AATAGTACTTTTTG--CTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCG 136876 ||| | || |||| | ||| ||||| | ||||| |||| || || | ||| Sbjct 1504120 AAT-GCACGTTTTTACCGAAATCTCCCACACCGTTTTGTAGAGGTCGCGGATCTCCTGCG 1504062 Query 136877 GAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGA---TGATTTTCATCAT---GA 136930 |||| || || ||||| | || || || || | || | ||| |||| || Sbjct 1504061 GAATCGATTCAATGTTCTGAATGGAACCATTATTAGACAAAATGTTGTTCTTCATATCGA 1504002 Query 136931 GATCAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTT 136990 |||| ||| | || | | || | | | ||||| || || || || | Sbjct 1504001 GATCCC------ATAGGCCCATCGCAGTCAGATCTTGCAGTAGATGATGGTTCACCACCT 1503948 Query 136991 GATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATT 137050 | | |||||||||||||| | || ||| | || ||| |||||||||| || | Sbjct 1503947 GGAACTCGCCCGATAGCACACGTCGATTGTAAACGTTCGACGTGTACGGCTCGAAAGACT 1503888 Query 137051 CGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAAT 137110 | ||||| |||||||| || || |||| || |||||||| || | || | |||| Sbjct 1503887 CATTGTTGCCCAAAATTTGCGCCGTCGAAGCGGTCGGCATCGGGGCCAACAGTAGCGAAT 1503828 Query 137111 TCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTTCG 137170 | || | ||||| || | | | || ||||| ||||||||| |||| ||| Sbjct 1503827 TACGAATGCCGTGCTTTGCGATCTTCTCTTTCAGCTCAGCCCAGTTCCAAAGATCCGTCG 1503768 Query 137171 ATTGGGTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGCAT 137230 || | ||||||| || | ||||||| || || | |||||| |||||| Sbjct 1503767 GTT---CCTTCTTCCACATCTCGTATTGCAAAATGCCTTTGCTCACCGGACTTCCTGCAT 1503711 Query 137231 AAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATAGT 137290 | | || || | || | | || |||| || || | || || ||||||| Sbjct 1503710 ATGTCTCGTACGGACCTTCCCGTGCTGCCAACTCGCAGCTAGCTTCCAGCGCCCCATAGT 1503651 Query 137291 AAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTCGTAGGGCATAT 137350 |||| | ||| | |||| | ||||| | | || |||| ||| ||||| || ||| Sbjct 1503650 AAATGGATTCAAATATTTGTTGATTCAGCTTTTGTGCCTCTTCGCTTTCGTATGG-ATAG 1503592 Query 137351 C-CAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTG 137405 | || | | ||| ||||| || | || || | |||||||||||| || || || Sbjct 1503591 CGCATCAAAATGAATGCATCGGCCATGCCCTGCACACCGATACCGATGGGCCTATG 1503536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445090627824960