Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 1e-26
seq646 122 8e-23
seq112 105 6e-18
>seq1
Length=31626230
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
||||| || || || |||||| || |||||||| |||| || || || |||| |||
Sbjct 27268637 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCTTCC 27268578
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
||||||||||| || || |||| |||||||| || | ||||| || |||||||||| |
Sbjct 27268577 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 27268518
Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707
||||| ||||| | | | |||||| || || ||||||| |||||| || ||
Sbjct 27268517 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTG 27268458
Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| |||| || ||||| || ||||||||
Sbjct 27268457 CCAGTCAGCGTCTTCACGAAGATCTGCAT 27268429
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
||||| || || || |||||| || |||||||| |||| || || || | || |||
Sbjct 27268409 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCC 27268350
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
||||||||||| || || |||| |||||||| || | ||||| || |||||||||| |
Sbjct 27268349 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 27268290
Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707
||||| ||||| | | | |||||| || || ||||||| |||||| || ||
Sbjct 27268289 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTG 27268230
Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| |||| || ||||| || ||||||||
Sbjct 27268229 CCAGTCAGCGTCTTCACGAAGATCTGCAT 27268201
Score = 84.2 bits (92), Expect = 2e-11
Identities = 169/250 (68%), Gaps = 3/250 (1%)
Strand=Plus/Minus
Query 35487 TTTATACAATCATCTCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCT 35546
||||| |||||| || | | |||||||| | | | |||| ||| | || |
Sbjct 15287684 TTTATTAAATCAT---TTAAATGCCACCACGCAGACGAAGGACCAGATGAAGGGTCGATT 15287628
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| |||||||| ||||| | || || || | || ||||||||||| || || || |
Sbjct 15287627 CCTTCTGAATGTTATAATCCGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCGAAGA 15287568
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
||| |||||||| || | || | | |||||||||| ||||| ||| | |
Sbjct 15287567 TCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTCT 15287508
Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726
| | || ||| | |||||||| | |||||||| || || |||| || || || |
Sbjct 15287507 CGATGGTATCGGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAGTCAGGGTCTTGACGA 15287448
Query 35727 ATATCTGCAT 35736
| ||||||||
Sbjct 15287447 AGATCTGCAT 15287438
>seq646
Length=9740529
Score = 122 bits (134), Expect = 8e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||| ||| | || |||||| ||||||||||| |||| || || || |||| ||
Sbjct 6802109 CACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGTGTGCGACCGTCCTC 6802050
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|||||||||||| ||||| |||| |||||||| |||| || | || |||||| |||
Sbjct 6802049 CAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTATCCTG 6801990
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
|||||| ||||| | | | | ||| || | || ||||| | || || |||||
Sbjct 6801989 GATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTTTT 6801930
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||| | ||||| || || ||||||||
Sbjct 6801929 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 6801900
Score = 109 bits (120), Expect = 5e-19
Identities = 168/239 (70%), Gaps = 3/239 (1%)
Strand=Plus/Minus
Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566
|| |||||||| | | || ||||| ||| | ||| ||||| ||||||||||| ||
Sbjct 9473347 TTACCACCACGGAGTCGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCC 9473288
Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626
| || || || | || ||||||||||| || || || || | |||||||| ||||
Sbjct 9473287 GACAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGG 9473228
Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686
|| | | ||||| ||| ||||||| ||||| | || | | |||||| | ||
Sbjct 9473227 GGGATTCCTTCCTTATCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCG 9473168
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGC---ATTCTGTG 35742
||||| | ||||| || || || || | |||||||| || |||||| ||||||||
Sbjct 9473167 ACCTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGATTCTGTG 9473109
>seq112
Length=21277816
Score = 105 bits (116), Expect = 6e-18
Identities = 201/290 (69%), Gaps = 6/290 (2%)
Strand=Plus/Plus
Query 44103 CTAGAGACGGCCTCCACCCATGATCCTTTGTGGAACGCTGCCCAAACACAACTGTTGCGA 44162
|| || |||||| || || || | |||||||| | ||||| || || |||
Sbjct 19215514 CTGGAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGCAG 19215573
Query 44163 GAAGGTAAAATGCACCAATACATGCGTATGTATTGGTGCAAGAAGATATTGGAGTGGTCG 44222
|| || ||||||||| | |||| ||||| ||| |||||||||| |||||||| |
Sbjct 19215574 GAGGGCAAAATGCACGGCTTTCTGCGGATGTACTGGGCCAAGAAGATACTGGAGTGGACA 19215633
Query 44223 GAAG-ATGCG-CAAACCGCGCTCGTTCATGCCATCTATCTGAACGACAAGTACAGTTTGG 44280
|| | || | || ||||||| || |||||||||||||| |||||| |||
Sbjct 19215634 AAAACACCCGACGAA--GCGCTCGAGATAGCGATCTATCTGAACGATCGGTACAGCCTGG 19215691
Query 44281 ACGGTCGCGACCCCAACGGGTACGTAGGATGTATGTGGTCCATTTGCGGTGTCCACGA-C 44339
| || ||||| || ||||||||||| || || |||||||| || || | ||||| |
Sbjct 19215692 ATGGGCGCGATCCGAACGGGTACGTCGGGTGCATGTGGTCGATCGCGGGCATACACGATC 19215751
Query 44340 AGGGCGTGGCGAGAGCTACCCATCTACGGCAAAGTGCGCTACATGAACTA 44389
|||| ||| |||| || | ||||||| | | |||||||||||
Sbjct 19215752 AGGG-ATGGAAGGAGCGCGAAATTTTCGGCAAAATCAGGTACATGAACTA 19215800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450789779524240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |