Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq113 205 9e-48 seq646 127 2e-24 seq1 87.8 2e-12 >seq113 Length=1764599 Score = 205 bits (226), Expect = 9e-48 Identities = 1169/1850 (63%), Gaps = 52/1850 (3%) Strand=Plus/Plus Query 7472 ACGAGCGCGATTACGATTACCGTTATTTTGCCGTAAAAACTTTAAAAAACGGCTACTTGT 7531 |||| || |||| | ||| ||||| | | | |||||||| || ||| ||| Sbjct 1502454 ACGATCGTGATTTTGGATACAACTATTTCGGCTTCAAAACTTTGGAACGATCCTATCTGT 1502513 Query 7532 TGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGG 7591 |||| ||| ||| | || |||||| || |||||| || ||||||| ||| | | Sbjct 1502514 TGAAGATCCGGGGCAAGATCGTTGAACGACCGCAGCACATGTTGATGCGCGTTGCGATCG 1502573 Query 7592 GCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAAC 7651 | ||||| || ||||| || || || ||| | || || ||| | || |||| | Sbjct 1502574 GTATTCATGGTGAAGATATCGATGCAGCCATCGAGACATACAATTTGCTGTCGGAGCGCT 1502633 Query 7652 AGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCT-CAATTGTCC 7710 | ||||| || || || || |||||||| || |||| || | ||||| || ||||| Sbjct 1502634 ACTTTACCCATGCCTCACCTACCATGTTCGCAGCGGCAACGCA-GCGCCCGCAGTTGTCA 1502692 Query 7711 TCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGC 7770 || |||||| ||||||||||| || ||||| || || || || ||| |||||||| Sbjct 1502693 TCCTGTTTTCTGCTAACCATGTCTGACGACAGTATTGAAGGTATCTACGACACGCTGAAG 1502752 Query 7771 GATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGC 7830 | ||||| ||||| |||| | |||||||| || |||||||| || | || Sbjct 1502753 CAGTGCGCGCTGATTTCAAAATCTGCTGGCGGAATTGGGCTGAACGTGCACTGTATTCGT 1502812 Query 7831 GCCAACGGTAGCCGCATCGTGTCC---ACCAACGGAAAAGCCAGCGGTTTAGAGCCCATG 7887 || || || | || | | | ||| || ||||| | | | ||| || | || ||| Sbjct 1502813 GCGAAGGGAA--CGTA-CATCTCCGGTACGAACGGGATTTCGAACGGATTGGTACCAATG 1502869 Query 7888 TTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAAGCGCAAA------ 7941 ||||||||| ||| || ||| || |||| |||||||| || || |||| Sbjct 1502870 CTGCGCGTGTACAACAATACGGCTCGGTATGTGGACCAGGGTGGCAA---CAAACGGCCG 1502926 Query 7942 GGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTG 8001 || || |||||| || | || || ||||||| || | | || | || |||| Sbjct 1502927 GGAGCTTTTGCCATATACCTCGAACCATGGCACGGCGATGTATTCGAGTTTCTGGATCTA 1502986 Query 8002 CGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTG 8061 |||| || || || || ||||| | |||| || | ||||| | Sbjct 1502987 AAGAAGAACACCGGCAAGGAGGAGGTGCGTGCACGCGACATGTTCTACGCACTGTGGATA 1503046 Query 8062 CCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCGAT 8121 || || ||||| |||| ||| || | ||| | ||| || ||||| || | Sbjct 1503047 CCGGACCTGTTCATGAAGCGGGTAGAGGCGAACGAAATGTGGAGCCTGATGTGTCCTCAC 1503106 Query 8122 CGTTGCCCTTTATT--AAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAAT 8179 ||| || ||| | |||| || || | | || || |||||| | Sbjct 1503107 GATTGTCCCGGATTGGCAGAAAC--TTGGGGCGAAGAGTTCGAGACGCTGTACACCGGTT 1503164 Query 8180 ACGAACACGACGG-CGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCATT 8238 ||||| | || || ||| | | || || ||||| |||| || || ||| || Sbjct 1503165 ACGAAAAAGAGGGACGC-TTTATTCGACAGGTGAAGGCGCAAGATTTGTGGTTCGCGATC 1503223 Query 8239 ATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCC 8298 || |||| || ||||| || | ||||| ||||||||||| || || ||||| Sbjct 1503224 ATTGAATCGCAGGTGGAAACGGGCGTACCGTATATGCTGTACAAGGATGCATGCAATCGT 1503283 Query 8299 AAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTA 8358 |||||||| ||| ||||| || |||||| ||| ||| ||||| | |||||||| Sbjct 1503284 AAAAGCAACCAACAGAACGTTGGAACCATTAAGTGCTCCAACTTGTGCACCGAAATTGTG 1503343 Query 8359 CAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCG 8418 |||| || || || | || ||||||||||| || ||| | | ||| | Sbjct 1503344 GAGTATTCGTCGAAAGATGAGATTGCGGTTTGCAATCTGGCCTCGATTGCACTGAACATG 1503403 Query 8419 TTCGTTGATCGACGCTCA-AACACTTACGACTTTGAACAATTGAAAAACGCCGTGCAAGT 8477 |||| | | ||| | | || |||||||||| | |||| | | || |||| Sbjct 1503404 TTCG----TAAAGGCTGACAGGACATACGACTTTGCGAAGCTGAAGGATGTCG-CCAAG- 1503457 Query 8478 GACGGTA--CGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTT---GGAAGAA 8532 || || |||||| | | ||||| || |||| | ||||| | ||||| | Sbjct 1503458 ATCGTTACGCGCAATCTGAACAAAATCATCGACATCAACTACTATCCGGTACCGGAAGCA 1503517 Query 8533 GCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGAC 8592 |||| || || |||||||| || ||| | || | || ||||| || ||||||| Sbjct 1503518 AAGCGC---TCCAATATGCGCCATAGGCCCATCGGTATCGGTGTGCAGGGCATGGCCGAT 1503574 Query 8593 GCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAA 8652 || || || ||||| || ||||||||| |||| || | | ||| || | || Sbjct 1503575 GCATTCATTTTGATGCGCTATCCATACGAAAGCGAAGAGGCACAAAAGCTGAATCAACAA 1503634 Query 8653 ATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTT----GCCCGAGA 8708 ||| ||| | | || || || || | ||||| ||||| | | || || || || Sbjct 1503635 ATATTTGAATCCATTTACTATGGGGCGCTGGAAGCTAGCTG-CGAGTTGGCAGCACGGGA 1503693 Query 8709 ATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGA 8768 | || ||||||| | || || || || || | ||| || || ||||||||||| Sbjct 1503694 A---GGTCCGTACGAGACATATGCAGGAAGTCCGGTGAGCAAAGGCATTTTGCAATACGA 1503750 Query 8769 CATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGC 8828 |||||||| || || | | ||||| ||| || ||||| || || || Sbjct 1503751 GATGTGGAAGAAGGAACCGACGGATCTTTGGAACTGGGCTGAGCTGAAAGAGAAGATCGC 1503810 Query 8829 TCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCA 8888 | ||| | || |||||||| || |||| ||||| ||||| |||| || || Sbjct 1503811 AAAGCACGGCATTCGTAATTCGCTACTGTTGGCCCCGATGCCGACCGCTTCGACGGCGCA 1503870 Query 8889 AATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGT 8948 ||| |||| ||||| || || || ||||||| ||| ||||| ||| |||| || Sbjct 1503871 AATTTTGGGCAACAATGAGTCTTTCGAGCCGTACACGTCGAACGTTTACAATCGACGTGT 1503930 Query 8949 GTTGGCCGGCGATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATCGAAGCGGG 9008 | | | ||||| || || |||| | |||| | ||| || ||| | ||| Sbjct 1503931 GCTATCGGGCGAGTTCCAGGTGGTGAACCATCATCTACTGCAAGATCTGACTGCGATGGG 1503990 Query 9009 CGTTTACGACGACAAAATGCGCGATGCCATCGTGGAAGCCAACGGCAGCGTTCAGAACAT 9068 | | | || | | ||| | ||| || || || | |||||||||| Sbjct 1503991 CCTATGGGATCTCGATATGAAGAACAACATTTTGTCTAATAATGGTTCCATTCAGAACAT 1504050 Query 9069 TGACGCGGTGCCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAATGAAGCAAAG 9128 ||| || | || || | || || || || ||||| || ||||| || | || Sbjct 1504051 TGAATCGATTCCGCAGGAGATCCGCGACCTCTACAAAACGGTGTGGGAGATTTCGGTAAA 1504110 Query 9129 CACGCTGATCGGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAA 9188 ||| || |||||||| ||| | || || ||||| |||||| ||||| || || Sbjct 1504111 AACGTGCATTAAAATGGCTGCCGATCGCGGGGCATTTATCGATCAGTCACAATCGTTCAA 1504170 Query 9189 CGTGTTCGTAGCCGCACC-AACTTACGC--TTTGATGTCCAGCATTCATTATTTAACTTG 9245 | | ||| |||| || |||| || ||| ||| || |||| | || Sbjct 1504171 CATACACGTGGCCGAGCCGAACTATGGCAAGCTGACGTC---GATCCATTTCTACGGCTG 1504227 Query 9246 GAAAATGGGTTTAAAAACAGGCATGTACTATTTGCGCACAAAACCCGCCG 9295 ||| ||||| | || || |||||||||||||||||||| || || |||| Sbjct 1504228 GAAGATGGGACTGAAGACGGGCATGTACTATTTGCGCACCAAGCCGGCCG 1504277 >seq646 Length=9740529 Score = 127 bits (140), Expect = 2e-24 Identities = 169/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 ||| || || | |||||||| ||| || || || || |||||||| |||||||||||||| Sbjct 9473348 CTTACCACCACGGAGTCGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTC 9473289 Query 134543 GCCAACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCG 134600 | || | ||| || || || ||||| ||||| || || || | |||||||||||| Sbjct 9473288 --CGACAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCC 9473231 Query 134601 GGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGAT 134660 || || || ||||| || || || || ||| || || || | ||||| || | Sbjct 9473230 GGGGGGATTCCTTCCTTATCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGC 9473171 Query 134661 TCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || ||||| || ||||| | ||||| |||||||| ||||| Sbjct 9473170 TCGACCTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 9473118 Score = 123 bits (136), Expect = 3e-23 Identities = 163/224 (73%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| || || || || || ||||| ||||||||||||||| || ||||| Sbjct 6802117 AGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGG--ACAGTGTGC 6802060 Query 134556 GA--GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTT 134613 || ||| || ||||| || || ||||| |||| |||||||||||| ||||| ||||| | Sbjct 6802059 GACCGTCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATGCCCT 6802000 Query 134614 CTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAG 134673 | || || || || || || || || | || || || | || || || || | Sbjct 6801999 CCTTATCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGG 6801940 Query 134674 TAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||||||||||| || | ||||| ||||| || ||||| ||| Sbjct 6801939 TAATGGTTTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 6801896 >seq1 Length=31626230 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG--TCGT 134562 || || || || || |||||||| |||||||| || || | || | ||| | || | Sbjct 15287646 ACCAGATGAAGGGTCGATTCCTTCTGAATGTTATAATC--CGACAGAGTGCGGCCATCCT 15287589 Query 134563 CGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTT 134622 | ||||| |||||||| || |||| |||||||||||| || || || || || || || | Sbjct 15287588 CCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCCT 15287529 Query 134623 GAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTT 134682 |||| || || || || | || ||||| | ||||| || || || || || | Sbjct 15287528 GAATCTTGGCCTTAACGTTCTCGATGGTATCGGAAGGCTCCACCTCAAGGGTGATCGTCT 15287469 Query 134683 TACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 | || || | || || ||||| || ||||| || Sbjct 15287468 TTCCAGTCAGGGTCTTGACGAAGATCTGCATGTT 15287435 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||| || | || || | || | ||| | || || ||||| || |||||||||||| Sbjct 27268658 TTTCCCCCGCGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCG 27268599 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | ||| | ||| || ||||| || || || || |||| |||||||||||| || Sbjct 27268598 GACAGAGTGCGTCCGTCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGA 27268539 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || ||||| || || || || || || || || || | ||||| |||| || Sbjct 27268538 GGAATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCG 27268479 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || ||||| || || || | || || ||||| || ||||| Sbjct 27268478 ACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505394116748560