Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq279 113 4e-20 >seq279 Length=312248 Score = 113 bits (124), Expect = 4e-20 Identities = 190/271 (70%), Gaps = 8/271 (3%) Strand=Plus/Minus Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC---TGG 19604 ||| ||||| || || | |||||| | || ||||| || || | || | ||| Sbjct 149549 TTTACACATAATCATTTTTGATGAAATTGATGCAATTTGCAAAGCTCGTGGAACGGTTGG 149490 Query 19605 TGTAAAT---GGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661 || ||| || |||||||| || |||||||||||||| || | ||| | |||||||| Sbjct 149489 TGGCAATTCCGGTGTACATGATACGGTTGTCAATCAACTGTTGGCCAAAATTGACGGTGT 149430 Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAG 19721 | | || |||| |||||| | || || || |||||||| ||| || | |||||| Sbjct 149429 TGAACAGTTGAACAATATTCTGGTCATCGGAATGACTAACAGAAGAGACATGATAGACGA 149370 Query 19722 CGC-CTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAAT 19780 || |||| | || || ||||| ||||| | |||| ||||| | | | || ||||| Sbjct 149369 AGCTCTTA-TGCGTCCTGGTCGACTGGAAGTGCAGATGGAAATCAGCCTTCCTAATGAAG 149311 Query 19781 GTGGACGTGTGGAAATTTTAAACATACATAC 19811 || || ||| ||||||| ||||| ||||| Sbjct 149310 AAGGTCGCGTGCAAATTTTGAACATCCATAC 149280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397452715771390