Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq113 221 1e-52 seq646 114 1e-20 >seq113 Length=1764599 Score = 221 bits (244), Expect = 1e-52 Identities = 1052/1648 (64%), Gaps = 49/1648 (3%) Strand=Plus/Minus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || || ||||| || || ||||| ||||||||||||||||||||| |||||||| Sbjct 1504305 TTGTCTACCGTGAACTGGATTGCATTAACGGCCGGCTTGGTGCGCAAATAGTACATGCCC 1504246 Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGG--TAATTGG 130523 || || ||||| || || || || ||||| || | ||| || || | Sbjct 1504245 GTCTTCAGTCCCATCTTCCAGCCGTAGAAATGGATCGACGTCA--GCTTGCCATAGTTCG 1504188 Query 130524 GTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAG 130583 | | |||||| |||||||| |||||| || ||||| ||||| || || | || |||| Sbjct 1504187 GCTCGGCCACGTGTATGTTGAACGATTGTGACTGATCGATAAATGCCCCGCGATCGGCAG 1504128 Query 130584 CCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATG 130642 |||| | | ||| | ||||| |||||||| | || ||||| || || | || Sbjct 1504127 CCATTTTAATGCACGTTTTTACCGAA-ATCTCCCACACCGTTTTGTAGAGGTCGCGGATC 1504069 Query 130643 TGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGC 130702 | | || || |||| |||| | ||| || || | | ||| | ||| | Sbjct 1504068 TCCTGCGGAATCGATTCAATGTTCTGAATGGAACCATTATTAGACAAAATGTTGTTCTTC 1504009 Query 130703 ATACTTTTATCGTACAATCCAA--GCTGTACAAGATCTTTTACCAAATGATTATTAATGA 130760 ||| ||| | | || | || || ||||||| | | ||||| || | | Sbjct 1504008 ATATCGAGATCCCATAGGCCCATCGCAGTC--AGATCTTGCAGTAGATGATGGTTCACCA 1503951 Query 130761 TTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGG 130820 || || || || | || || |||| | ||||| ||| |||| |||| || || | Sbjct 1503950 CCTGGAACTCGCCCGATAGCACACGTCGATTGTAAACGTTCGACGTGTACGGCTCGAAAG 1503891 Query 130821 ATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAG 130880 | || |||||||| || ||||| || || | ||||| ||||| |||| | ||| | Sbjct 1503890 ACTCATTGTTGCCCAAAATTTGCGCCGTCGAAGCGGTCGGCATCGGGGCCAACAGTAGCG 1503831 Query 130881 AATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGG 130940 ||||||||| |||||| | | ||| || |||| ||| |||| | ||| ||| | Sbjct 1503830 AATTACGAATGCCGTGCTTTGCGATCTTCTCTTTCAGCTCAGCCCAGTTCCAAAGATCCG 1503771 Query 130941 TAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGATT 131000 | |||| | || |||||||| || |||| | |||||||| || | ||||| | Sbjct 1503770 TCGGTT---CCTTCTTCCACATCTCGTATTGCAAAATGCCTTTGCTCACCGGACTTCCTG 1503714 Query 131001 CGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGT 131060 | | | ||||| ||||| |||| ||| ||||||||||| || || | Sbjct 1503713 CATATGTCTCGTACGGACCTTCCCGTGCTGCCAACTCGCAGCTAGCTTCCAGCGCCCCAT 1503654 Query 131061 AATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAA 131120 | ||||||| ||| ||||||| ||| | | || || | | ||| ||||| ||| Sbjct 1503653 AGTAAATGGATTCAAATATTTGTTGATTCAGCTTTTGTGCCTCTTCGCTTTCGTATGGAT 1503594 Query 131121 ATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATGTT 131180 | ||| ||||| || || || || | ||||| | || | || | || ||||| Sbjct 1503593 AGCGCATCAAAATGAATGCATCGGCCATGCCCTGCACACCGATACCGATGGGCCTATGGC 1503534 Query 131181 TTAAATTACATTTACGC-GAACATTCGGT--GGGATAAAGGTTAATGTCAATTATTTTGT 131237 | ||| | ||| | | |||| ||||| ||| ||||| || ||||||| Sbjct 1503533 GCATATTGGA---GCGCTTTGCTTCCGGTACCGGATAGTAGTTGATGTCGATGATTTTGT 1503477 Query 131238 TTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCCAG 131297 | | ||||||| || || | | ||| |||| || | || || | || | Sbjct 1503476 TCAGATTGCGCGTAACGATCTTGGCGACATCCTTCAGCTTCGCAAAGTCGTATGTCC--- 1503420 Query 131298 TTTCGAGGTTTACAAATTGATTTACA---CATATTGACGCCAGATTACAAACTGCCGTTT 131354 | || ||||| || || | || || || || |||||||| ||||| || | | Sbjct 1503419 TGTCAGCCTTTACGAA--CATGTTCAGTGCA-ATCGAGGCCAGATTGCAAACCGCAATCT 1503363 Query 131355 CGTCATAATCG--CAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCC 131412 | || | ||| |||||| |||||||||| |||||| || || ||| ||||| || Sbjct 1503362 CATCTT--TCGACGAATACTCCACAATTTCGGTGCACAAGTTGGAGCACTTAATGGTTCC 1503305 Query 131413 CAAATTTTGTTGATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGC 131471 | || ||||| ||||||||| ||| |||| |||||||||| ||| || || || Sbjct 1503304 AACGTTCTGTTGGTTGCTTTTACGATT-GCATGCATCCTTGTACAGCATATACGGTACGC 1503246 Query 131472 CCGTTTCGACTTGAGTTTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATTGATA 131529 ||||||| || || | |||||| | | |||| | | | | | || || || Sbjct 1503245 CCGTTTCCACCTGCGATTCAATGA--TCGCGAACCACAAATCTTGCGCCTTCACCTGTCG 1503188 Query 131530 TTTGTATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGT-TTTGGCCAAACG 131588 | | | || |||||||||| ||||| ||| || || | || | || || Sbjct 1503187 AATAAAGCGTCCCTCTTTTTCGTAACCGGTGTACAGCGTCTCGAACTCTTCGCCCCAAGT 1503128 Query 131589 AACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAA 131648 ||| |||| |||||| ||| |||||||| || ||||| ||||| || | Sbjct 1503127 TTCTG-CCAATCCGGGACAATCGTGAGGACACATCAGGCTCCACATTTCGTTCGCCTCTA 1503069 Query 131649 CTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCT 131708 | |||||||| |||| ||||| | ||| | ||||| |||| || | || || Sbjct 1503068 CCCGCTTCATGAACAGGTCCGGTATCCACAGTGCGTAGAACATGTCGCGTGCACGCACCT 1503009 Query 131709 CTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTT 131768 | || | || | | || || | || | ||| || || | || | ||||| |||| Sbjct 1503008 CCTCCTTGCCGGTGTTCTTCTTTAGATCCAGAAACTCGAATACATCGCCGTGCCATGGTT 1502949 Query 131769 CCAAATACACTGCCATTGCGCC------TTTGCGCTTACCGCCTTGATTAACATGACGAA 131822 | | || | || | || || |||| || || || || | |||| ||| Sbjct 1502948 CGAGGTATATGGCAAAAGCTCCCGGCCGTTTG---TTGCCACCCTGGTCCACATACCGAG 1502892 Query 131823 CCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCT 131882 || | |||||||| ||||||| ||| || |||| ||||| | | || || || | Sbjct 1502891 CCGTATTGTTGTACACGCGCAGCATTGGTACCAATCCGTTCGAAATCCCGTTCGTACCGG 1502832 Query 131883 TAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATT 131942 ||||| | || || || | || ||| ||||| || ||||| || || | ||| Sbjct 1502831 AGATGTACGTTCCCTTCGCACGAATACAGTGCACGTTCAGCCCAATTCCGCCAGCAGATT 1502772 Query 131943 TAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAA 132002 | || || || ||||| | | || |||| ||||||||||| | ||||| | | | Sbjct 1502771 TTGAAATCAGCGCGCACTGCTTCAGCGTGTCGTAGATACCTTCAATACTGTCGTCAGACA 1502712 Query 132003 TGTCGACTAAAAAGCAAGAGGACAACTG 132030 || | | ||| || || |||||||| Sbjct 1502711 TGGTTAGCAGAAAACAGGATGACAACTG 1502684 >seq646 Length=9740529 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||||| || | |||| ||| | || || || || ||||| ||||||||| Sbjct 6802127 GCCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 6802068 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || |||| |||| || ||||| |||||||| | || |||||||| ||||||||||| Sbjct 6802067 CAGTGTGCGACCGTCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGG 6802008 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| ||||| |||||| |||| | || | || || | || || || Sbjct 6802007 GATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 6801948 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||| ||||| || ||||| || ||||| ||||| Sbjct 6801947 CTCAAGGGTAATGGTTTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 6801900 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||| ||| | ||||| || || ||||| |||||||| || |||| | Sbjct 9473332 CGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGACCA 9473273 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || ||||| || |||||| | ||||||||||| |||||||| || | || || ||| Sbjct 9473272 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCTTCCTTA 9473213 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| |||| |||| | ||||| | | || || || || || || Sbjct 9473212 TCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 9473153 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || || |||||||| || || ||||| Sbjct 9473152 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 9473118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424930888713936