Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq668 107 2e-18
seq24 107 2e-18
seq113 84.2 3e-11
>seq668
Length=6225679
Score = 107 bits (118), Expect = 2e-18
Identities = 149/206 (72%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 179038 GTGAAGATGTACCTCGTTTGA--GACGC-ATCTTTGCCACCCATGAGACGCGTCCCAAAT 179094
|||||||||||||| | || | ||| ||| || |||||| | |||||||| || ||
Sbjct 1120236 GTGAAGATGTACCTAG---GACTGGCGCTATCCTTTCCACCCGTCAGACGCGTACCGAAC 1120292
Query 179095 TGACCACATGGCTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTG 179154
||||||| || | || |||||||| || || || | |||| | |||||| |||
Sbjct 1120293 TGACCACCCGGATAGAGCAGATTGATGTTATTGCTTCCGACATAGTTCTGGGCCAAATTG 1120352
Query 179155 ACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAAGCCGACTTGTCCGCCACATAT 179214
|| ||||| ||| || ||||||||||||||| |||||||| || || || ||
Sbjct 1120353 ACGATCGTCGAACAGAGCGACTGTTCACCGTGATGGTAGGCCGACTTCTCTGCAACCGAT 1120412
Query 179215 GCCGCCAACTGCGCCACCTTCATCTC 179240
| |||||||| || ||||| | |||
Sbjct 1120413 CCGGCCAACTGGGCTACCTTAACCTC 1120438
>seq24
Length=5879236
Score = 107 bits (118), Expect = 2e-18
Identities = 274/411 (67%), Gaps = 6/411 (1%)
Strand=Plus/Minus
Query 11802 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 11861
|| |||||||| | |||||| ||| || || || || | || || || ||| ||
Sbjct 3063585 TACCAAGCATCCACGTCGGAGCTGTACGGAAAGGTGGCCGAGACACCGCAGAACGAGAAG 3063526
Query 11862 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGT-TGCGGCACATTGGCTCGT 11920
|| || ||||||||||| ||| || | | | ||| | | ||| | ||| | ||
Sbjct 3063525 ACACCGTTCTATCCACGCTCCCCGTACGCCTGTGCCAAGATGTACGGTT-ACTGGATTGT 3063467
Query 11921 GAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTCAACCACGA 11980
|| || || || ||| | || | | | || || ||| ||| |||||||| || |||||
Sbjct 3063466 GATAAACTATCGCGAAGCGTACGATATGTTCGCCTGCAATGGGATTCTCTTTAATCACGA 3063407
Query 11981 GTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCA-CCGAT-GGTATCAAACAA 12038
|||||| || || || |||| || ||| || || | ||| | ||| | || |
Sbjct 3063406 GTCACCGCGCCGGGGAGAAAATTTTGTCACACGCAAAATAACCCGCTCGGTGGCGAAGAT 3063347
Query 12039 ATCGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGG 12098
||| | || || ||||| | | || |||| || || | || || | ||||||
Sbjct 3063346 ATC--GCTCGGACAGCAGGAGTACCTCGAGCTGGGTAATCTTGATTCCAAGCGTGACTGG 3063289
Query 12099 GGACATGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGAC 12158
|| || ||||| ||||| || ||||| ||||||||| | | || || || || | ||
Sbjct 3063288 GGCCACGCCAAAGACTACGTCGAAGCGATGTGGCTCATGATGCAGCAGGACAAGCCAGAA 3063229
Query 12159 GAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 12209
|| | || | || || ||||| || |||||||| ||||||| || |||
Sbjct 3063228 GATTTCGTTATTGCCACCGGGGAAACGCACTCCGTGCGGGAGTTTGTAGAG 3063178
>seq113
Length=1764599
Score = 84.2 bits (92), Expect = 3e-11
Identities = 116/160 (73%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 118707 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 118766
|| || || || |||||||| || || | ||||||| || | ||||| | ||||
Sbjct 1503396 AGTGCAATCGAGGCCAGATTGCAAACCGCAATCTCATCTTTCGACGAATACTCCACAATT 1503337
Query 118767 TCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG-TT 118825
|| ||||||||||| || | ||||||||| || | ||||| ||| || | ||| | ||
Sbjct 1503336 TCGGTGCACAAGTTGGAGCACTTAATGGTTCCAACGTTCTGTTGGTT-GCTTTTACGATT 1503278
Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCC 118865
|| ||||||||||| ||||| || || ||||| |||
Sbjct 1503277 GCATGCATCCTTGTACAGCATATACGGTACGCCCGTTTCC 1503238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618429958761680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |