Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq668 102 1e-16 seq112 93.3 5e-14 >seq668 Length=6225679 Score = 102 bits (112), Expect = 1e-16 Identities = 131/179 (73%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 168457 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 168516 |||||| |||||| | ||||||||||| |||||||||| ||| | || |||||||| || Sbjct 1120262 ATCCTTTCCACCCGTCAGACGCGTACCGAACTGACCACCCGGATAGAGCAGATTGATGTT 1120321 Query 168517 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGAC--TTCA 168574 || || | |||| | ||||| ||||| ||| ||| |||| ||| |||| Sbjct 1120322 ATTGCTTCCGACATAGTTCTGGGCCAAATTGACGATC--GTCGAACAGAGCGACTGTTCA 1120379 Query 168575 CCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTC 168633 ||||| ||||| || ||||||||| || || | |||||||| || || || | ||| Sbjct 1120380 CCGTGATGGTAGGCCGACTTCTCTGCAACCGATCCGGCCAACTGGGCTACCTTAACCTC 1120438 >seq112 Length=21277816 Score = 93.3 bits (102), Expect = 5e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 94797 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 94856 ||||| || || || | || |||||| ||| || || ||||||||| ||| ||| Sbjct 19493469 CTTTGGCGAACGTGTCGTAGCGTTTGCGGCTGTCGAAGGAATCTTCTTCAGCGGTAGCTT 19493410 Query 94857 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 ||| |||| ||||| ||||||||||| || ||||| || || |||||| ||||| Sbjct 19493409 TGCCGCCATTTTCTGGCTAAAGAAGCGAGGCCTTATGCCGGGACTGACCTTCTCGAACGA 19493350 Query 94917 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||| || || || ||||| ||||| ||| || ||||| Sbjct 19493349 GCTGATTTCACGCGACGAAGGACTGCACTGTGACTTTGC 19493311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583255856864720