Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq646 168 2e-36 seq1 118 3e-21 seq223 96.9 1e-14 seq35 93.3 1e-13 seq657 91.5 4e-13 seq24 91.5 4e-13 >seq646 Length=9740529 Score = 168 bits (186), Expect = 2e-36 Identities = 177/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 140505 TACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAA 140564 ||| |||||||||| | || || || ||||| || ||||| || || ||||| || || Sbjct 9473350 TACTTACCACCACGGAGTCGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAG 9473291 Query 140565 TCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCA 140624 || || | || || ||||| || || || || || || ||||| ||||| |||||||| Sbjct 9473290 TCCGACAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCC 9473231 Query 140625 GGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGT 140684 || || |||||||| |||||||| || || || || ||||| || |||| || || || Sbjct 9473230 GGGGGGATTCCTTCCTTATCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGC 9473171 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || |||||||| | ||||| ||||| || ||||| || ||||||||||| Sbjct 9473170 TCGACCTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 9473118 >seq1 Length=31626230 Score = 118 bits (130), Expect = 3e-21 Identities = 240/356 (67%), Gaps = 3/356 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || |||||||| || | ||||| | | || |||||||||| || |||||||| | Sbjct 30784455 CCGGAAGAAATCTCCGCCATGGTGCTGGGCAAGATGAAGGAAACGGCCGAAGCATACCTC 30784396 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | || || | || ||| | || ||||| ||||| ||||| |||||||||||| Sbjct 30784395 GGAAAGAAGGTTACGCACGCAGTTGTCACGGTACCGGCCTACTTTAACGATGCCCAGCGT 30784336 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| || | || || ||| | || | | || || || ||| Sbjct 30784335 CAGGCGACGAAGGATGCGGGAACAATCGCCGGGCTGGTAGTGATGCGTATCATCAACGAA 30784276 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || || || || || ||||| || || || || || | | || | ||||| ||| | Sbjct 30784275 CCGACAGCCGCCGCCATTGCCTACGGTCTGGACAAGAAGGATGGC---GAAAAGAATGTG 30784219 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || | || ||| | ||||| ||||| || ||||| || || || || | || | || Sbjct 30784218 CTGGTGTTCGATCTGGGTGGCGGTACCTTCGATGTGTCGCTGCTGACCATCGACAACGGT 30784159 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 | ||||| || || || ||||| || ||||| ||||| |||||||| || Sbjct 30784158 GTGTTTGAGGTGGTGGCCACGAACGGTGACACCCATCTGGGTGGTGAAGATTTCGA 30784103 Score = 95.1 bits (104), Expect = 4e-14 Identities = 147/207 (71%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || |||||| | || || || || || || || | ||| | |||| | ||||||||| Sbjct 30784782 GGTATCGATCTCGGCACAACATACTCCTGCGTCGGTGTGTACAAAAACGGACGTGTAGAA 30784723 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA---CCGAA 349321 || ||||| || ||||| |||||| | | ||||| || ||||| ||||||| |||| Sbjct 30784722 ATTATTGCCAACGATCAGGGTAACCGTATTACGCCCTCGTACGTGGCATTTACCGCCGAC 30784663 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTG-CTGCTAATCCAAAAAATAC 349380 || ||| |||| |||||| | || || || | ||||| | | || || |||| || Sbjct 30784662 GGCGAACGTTTGATCGGTGATGCCGCCAAGAA-CCAGCTGACGACGAACCCCGAAAACAC 30784604 Query 349381 GGTTTTTGATGCTAAGCGACTTATTGG 349407 || || ||||| ||||| | ||||| Sbjct 30784603 CGTGTTCGATGCGAAGCGTTTGATTGG 30784577 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 5176843 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 5176784 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 5176783 CCCGGCATCTCCA 5176771 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 5189819 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 5189760 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 5189759 CCCGGCATCTCCA 5189747 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 8399473 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 8399532 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 8399533 CCCGGCATCTCCA 8399545 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 27577392 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 27577333 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 27577332 CCCGGCATCTCCA 27577320 >seq223 Length=17164539 Score = 96.9 bits (106), Expect = 1e-14 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 235880 TTCAATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACC 235939 |||| | |||||||||||| ||| ||||||| ||||||||| ||||| |||||||||| Sbjct 6864028 TTCACGACAGGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACC 6864087 Query 235940 GGGATCAAAACCCAGCATCTCCA 235962 |||||| | |||| ||||||||| Sbjct 6864088 GGGATCGATACCCGGCATCTCCA 6864110 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 6866803 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 6866744 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 6866743 CCCGGCATCTCCA 6866731 >seq35 Length=5844712 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 2839840 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2839899 Query 235950 CCCAGCATCTCCAT 235963 ||| |||||||||| Sbjct 2839900 CCCGGCATCTCCAT 2839913 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 2841214 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2841155 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 2841154 CCCGGCATCTCCA 2841142 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 2874287 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2874228 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 2874227 CCCGGCATCTCCA 2874215 >seq657 Length=9220809 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| | | Sbjct 6728697 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACTGGGATCGATA 6728638 Query 235950 CCCAGCATCTCCA 235962 ||||||||||||| Sbjct 6728637 CCCAGCATCTCCA 6728625 >seq24 Length=5879236 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 1739400 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 1739341 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 1739340 CCCGGCATCTCCA 1739328 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 1820266 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 1820207 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 1820206 CCCGGCATCTCCA 1820194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515241237174434