Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq113 237 2e-57 seq112 105 7e-18 >seq113 Length=1764599 Score = 237 bits (262), Expect = 2e-57 Identities = 1127/1755 (64%), Gaps = 72/1755 (4%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | || ||||| || ||| |||| || ||||| || || || || | Sbjct 1502543 CCGCAGCACATGTTGATGCGCGTTGCGATCGGTATTCATGGTGAAGATATCGATGCAGCC 1502602 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 |||||||||| | || || || | ||| || || || | || ||| | ||| Sbjct 1502603 ATCGAGACATACAATTTGCTGTCGGAGCGCTACTTTACCCATGCCTCACCTACCATGTTC 1502662 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 || | ||| | ||||||| |||| |||||| || | | ||| || ||| Sbjct 1502663 GCAGCGGCAACGCAGCGCCCGCAGTTGTCATCCTGTTTTCTGCTAACCATGTCTGACGAC 1502722 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 || ||||| || |||||||| ||||| ||| ||||||||| || || || | | || Sbjct 1502723 AGTATTGAAGGTATCTACGACACGCTGAAGCAGTGCGCGCTGATTTCAAAATCTGCTGGC 1502782 Query 19343 GGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAA 19401 || || ||| | || ||| | ||| || ||| || || ||| || ||||| Sbjct 1502783 GGAATTGGGCTGAACGTGCACTG-TATTCGTGCGAAGGGAACGTACATCTCCGGTACGAA 1502841 Query 19402 CGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 ||| | | |||| | || |||||||| ||||| | |||||| ||||| |||| || Sbjct 1502842 CGGGATTTCGAACGGATTGGTACCAATGCTGCGCGTGTACAACAATACGGCTCGGTATGT 1502901 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 ||||||| ||| |||||| ||| | || ||||| |||||||| |||||||||| Sbjct 1502902 GGACCAGGGTGGCAACAAACGGCCGGGAGCTTTTGCCATATACCTCGAACCATGGCACGG 1502961 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 || || | || || || || || |||| || | |||||| |||| || Sbjct 1502962 CGATGTATTCGAGTTTCTGGATCTAAAGAAGAACACCGGCAAGGAGGAGGTGCGTGCACG 1503021 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 |||| | ||| || ||||||| |||||||| |||||| || ||| ||| | |||| Sbjct 1503022 CGACATGTTCTACGCACTGTGGATACCGGACCTGTTCATGAAGCGGGTAGAGGCGAACGA 1503081 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGC 19701 | ||| ||||||||| || ||||| || || || | | || | ||||| | Sbjct 1503082 AATGTGGAGCCTGATGTGTCCTCACGATTGTCCCGGATTGGCAGAAACTTGGGGCGAAGA 1503141 Query 19702 GTTCAATGAGTTGTAC--CGGACTTACGTAGCCCAGGGCCGGTTCAA--GA-AGGTGGTC 19756 |||| | | ||||| ||| ||||| | |||| || || | || ||||| Sbjct 1503142 GTTCGAGACGCTGTACACCGG--TTACGAAAAAGAGGGACGCTTTATTCGACAGGTGAA- 1503198 Query 19757 CGGGCCCGGGACGTCTGGGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTA 19815 ||| | || | ||| | ||| || | || ||||| || || ||| |||||| Sbjct 1503199 --GGCGCAAGATTTGTGGTTC-GCGATCATTGAATCGCAGGTGGAAACGGGCGTACCGTA 1503255 Query 19816 CATGTGCTACAAGGACGCC-GCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCA 19874 ||| |||||||| || || | || || ||| || ||||| | || | || | Sbjct 1503256 TATGCTGTACAAGGATGCATGCAATCGTAAAAGCAAC-CAACAGAACGTTGGAACCATTA 1503314 Query 19875 AGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGT 19934 ||| |||||| |||| || ||||| ||||| ||| | || |||| ||| || | Sbjct 1503315 AGTGCTCCAACTTGTGCACCGAAATTGTGGAGTATTCGTCGAAAGATGAGATTGCGGTTT 1503374 Query 19935 GTAATCTGGCGTCCCTGTGC-CTGCCGACTTTCGTCAAGGCCTCCT---CCTTCGACTTT 19990 | |||||||| || | ||| ||| | ||||| ||||| | | | ||||||| Sbjct 1503375 GCAATCTGGCCTCGAT-TGCACTGAACATGTTCGTAAAGGCTGACAGGACATACGACTTT 1503433 Query 19991 GCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGG 20050 || || || | || || || | |||| ||||| |||||||| ||||||| Sbjct 1503434 GCGAAGCTGAAGGATGTCGCCAAGATCGTTACGCGCAATCTGAACAAAATCATCGACATC 1503493 Query 20051 AACTTTTACCCG--ACCG-AGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCG 20107 |||| || ||| |||| | || |||| || ||||||||||| |||| |||| Sbjct 1503494 AACTACTATCCGGTACCGGAAGCAAAGCGC---TCCAATATGCGCCATAGGCCCATCGGT 1503550 Query 20108 ATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCC 20167 ||||| || |||||| ||||||| | ||||| || | || ||| ||| | | Sbjct 1503551 ATCGGTGTGCAGGGCATGGCCGATGCATTCATTTTGATGCGCTATCCATACGA-AAGCGA 1503609 Query 20168 A-AGGCGCGCGAGC----TCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCC 20222 | |||| | ||| ||||||| || || || || | ||| | | ||| | Sbjct 1503610 AGAGGCACAAAAGCTGAATCAACAA----ATATTTGAATCCATTTACTATGGGGC---GC 1503662 Query 20223 TGGAATC---GTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGAC--GTTCAAGGGGTC 20277 ||||| | ||||| | || | ||| || ||||||||||| | || | || Sbjct 1503663 TGGAAGCTAGCTGCGAGTTGGCAGCACGGGAAGGTCCGTACGAGACATATGCAGGAAGT- 1503721 Query 20278 GCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGG--GGCGTCACTGAGAATGAGTTT 20335 || | | | | || || | || || |||||| | | || || || || Sbjct 1503722 -CCGGTGAGCAAAGGCATTTTGCAATACGAGATGTGGAAGAAGGAAC--CGACGGATCTT 1503778 Query 20336 TGGAGC------GCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTC 20389 |||| | | || || | ||||| | ||||| |||| || ||| | || Sbjct 1503779 TGGAACTGGGCTGAGCTGAAAGAGAAGATCGCAAAGCACGGCATTCGTAATTCGCTACTG 1503838 Query 20390 GTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAG 20449 | || || ||||||||||| ||||| || || || |||| ||||| ||| |||||||| Sbjct 1503839 TTGGCCCCGATGCCGACCGCTTCGACGGCGCAAATTTTGGGCAACAATGAGTCTTTCGAG 1503898 Query 20450 CCGTACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAAC 20509 ||||||||| | ||| | ||| || ||| || | || |||||| |||| ||| Sbjct 1503899 CCGTACACGTCGAACGTTTACAATCGACGTGTGCTATCGGGCGAGTTCCAGGTGGTGAAC 1503958 Query 20510 AAGCACCTGGTCCGCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAA 20569 | || || | | || || ||| | | ||| | | | || ||||| | Sbjct 1503959 CATCATCTACTGCAAGATCTGACTGCGATGGGCCTATGGGATCTCGATATGAAGAACAAC 1504018 Query 20570 A--TTGTCCGAGCCGGCGGGAGCGTCCAG-GCATTGGAT--ATCCCCCAGAACCTCAAGG 20624 | ||||| | || | | ||| ||||| || || || ||| | || | Sbjct 1504019 ATTTTGTCTAA--TAATGGTTCCATTCAGAACATTGAATCGATTCCGCAGGAGATCCGCG 1504076 Query 20625 ACATTTACAGGACCGTATGGGAAATCCC---ACAGAAGAGCATCATCGACATGGCGGCCG 20681 || | |||| || || ||||| || | | | | | |||| | | ||||| |||| Sbjct 1504077 ACCTCTACAAAACGGTGTGGGAGATTTCGGTAAAAACGTGCATTA---AAATGGCTGCCG 1504133 Query 20682 ATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGC- 20740 ||||||| || | ||||| ||||| || ||| |||| | | ||| | |||| | Sbjct 1504134 ATCGCGGGGCATTTATCGATCAGTCACAATCGTTCAACATACACGTGGCCGAGCCGAACT 1504193 Query 20741 CTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATG 20800 |||| ||||||| || || ||| | ||||||||| | | ||| || |||||||||||| Sbjct 1504194 ATGGC-AAGCTGACGTCGATCCATTTCTACGGCTGGAAGATGGGACTGAAGACGGGCATG 1504252 Query 20801 TACTATCTGCGGACC 20815 |||||| |||| ||| Sbjct 1504253 TACTATTTGCGCACC 1504267 Score = 179 bits (198), Expect = 4e-40 Identities = 1025/1610 (64%), Gaps = 58/1610 (4%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || ||||||||||||||||||||||| || ||| ||||||| ||||| | || || | Sbjct 1504266 GTGCGCAAATAGTACATGCCCGTCTTCAGTCCCATCTTCCAGCCGTAGAAATGGATCGAC 1504207 Query 78250 GACAGCTTGGCCAGA-CTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 | |||||| |||| | |||| | ||| | ||||||| ||| || ||||| ||||| Sbjct 1504206 GTCAGCTT-GCCATAGTTCGGCTCGGCCACGTGTATGTTGAACGATTGTGACTGATCGAT 1504148 Query 78309 GTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGT 78368 | || ||||| ||||| ||||| | ||| || ||| || ||||||||| | || Sbjct 1504147 AAATGCCCCGCGATCGGCAGCCATTTTAATGCACGTTTTTACCGAAATCTCCCACACCGT 1504088 Query 78369 CCGGTAAATGGCCTTCAGCTCTTCCTGGAT--GTCCAGCGCT-TGTACGCTCCCACCGGC 78425 ||| | | | | ||| | | | || | || | | || | | ||| Sbjct 1504087 TTTGTAGAGGTCGCGGATCTCCTGCGGAATCGATTCAATGTTCTGAATGGAACCATTATT 1504028 Query 78426 TCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGGAC 78485 || ||| | ||||| || | | | ||| | ||| ||||| | | Sbjct 1504027 AGACAAAATGTTGTTCTTCATATCGAGATCCCATAGGCCCATCGCAGTCAGATCTTGCAG 1503968 Query 78486 CAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGT 78545 || || |||| | || ||||||||| | || || || ||| | ||| | Sbjct 1503967 TAGATGATGGTTCACCACCTGGAACTCGCCCGATAGCACACGTCGATTGTAAACGTTCGA 1503908 Query 78546 CGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCAT 78605 ||||||||||||||||| ||| ||||| |||| || || || ||||| ||||||||||| Sbjct 1503907 CGTGTACGGCTCGAAAGACTCATTGTTGCCCAAAATTTGCGCCGTCGAAGCGGTCGGCAT 1503848 Query 78606 GGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAG----GC 78661 || || | |||||| ||||| |||| || ||| | ||||| | || || || Sbjct 1503847 CGGGGCCAACAGTAGCGAATTACGAATGCCGTGCTTTGCGATCTTCTCTTTCAGCTCAGC 1503788 Query 78662 C--GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGA 78719 | || ||||| || ||| | || |||||| || ||| | || || | | Sbjct 1503787 CCAGTTCCAAAGATCCGTCGGTTCCTTCTTCCACATCTCGTATTGCAAAATGCCTTTGCT 1503728 Query 78720 CGCCGGCGACCCCTTG--AACGTCTCGTAAGATCCCTCC--TCCTTGGCGAGTTCGCATG 78775 | ||| ||| | || | |||||||| | || ||| | || || | ||||| Sbjct 1503727 CACCG--GACTTCCTGCATATGTCTCGTACGGACCTTCCCGTGCT--GCCAACTCGCAGC 1503672 Query 78776 ACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTG----AGCTCGCGC 78831 | ||| ||| | | ||| | | || || || |||||| |||| | Sbjct 1503671 TAGCTTCCAGCGCCCCATAGTAAATGGATTCAAATAT----TTGTTGATTCAGCTTTTGT 1503616 Query 78832 GCCT-TGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGAC 78890 |||| | || ||| | | | || | || ||||| ||||||||| |||||| || Sbjct 1503615 GCCTCTTCGCT-TTCGTATGGATAGCGCATCAAAATGAATGCATCGGCCATGCCCTGCAC 1503557 Query 78891 GCCGATAGCGATCGGTCGGTGGCGCATGTT---GCTCTTTCGGGCCGCCTCGGT--CGGG 78945 |||||| |||| || | |||||||| || || |||| || | |||| ||| Sbjct 1503556 ACCGATACCGATGGGCCTATGGCGCATATTGGAGCGCTTT---GCTTC--CGGTACCGGA 1503502 Query 78946 TAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTAC 79005 || |||| ||||||| |||||| || ||||| |||| | | || || | | Sbjct 1503501 TAGTAGTTGATGTCGATGATTTTGTTCAGATTGCGCGTAACGATCTTGGCGACATCCTTC 1503442 Query 79006 AATTTGGCGAAATC-AAAATGATTTC--CTTTGATGAAAGTCGGTAG-GCACAGCGATGC 79061 | || || || || | | | || | || | ||| | || ||| | ||| || Sbjct 1503441 AGCTTCGCAAAGTCGTATGTCCTGTCAGCCTTTACGAACATGTTCAGTGCA-ATCGAGGC 1503383 Query 79062 CAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATT 79121 ||| ||||| || || |||| || ||| ||| | ||||| |||||||| || Sbjct 1503382 CAGATTGCAAACCGCAATCTCATCTTTCGACGAATACTCCACAATTTCGGTGCACAAGTT 1503323 Query 79122 AGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTA 79181 || |||| ||||| || | ||||| |||||||| || || || || |||||||| Sbjct 1503322 GGAGCACTTAATGGTTCCAACGTTCTGTTGGTTGCTTTTACGATTGCATGCATCCTTGTA 1503263 Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGA--GAACGCCGTCCCAGATGTCC 79239 ||| ||||| || || || ||||| | || | || || || ||| | || Sbjct 1503262 CAGCATATACGGTACGCCCGTTTCCACCTG-CGATTCAATGATCG-CGAACCACAAATCT 1503205 Query 79240 CGGGCCCGGACAACCTTC--TTGTACCGACCCTGTGCGACGTACGTCCG--GTACAACTC 79295 | ||| || | || | | || |||| | |||| ||| ||||| | Sbjct 1503204 TGCGCC--TTCACCTGTCGAATAAAGCGTCCCTCTTTTTCGTA--ACCGGTGTACAGCGT 1503149 Query 79296 GTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTG 79355 | ||| | || || | || | || || || || ||||| || ||||||||| Sbjct 1503148 CTCGAACTCTTCGCCCCAAGTTTCTGCCAATCCGGGACAATCGTGAGGACACATCAGGCT 1503089 Query 79356 CCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAA 79415 ||| |||| | ||| ||| || |||||| |||||||| |||||||| || ||| Sbjct 1503088 CCACATTTCGTTCGCCTCTACCCGCTTCATGAACAGGTCCGGTATCCACAGTGCGTAGAA 1503029 Query 79416 GAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCAT 79475 | |||||| ||||| |||||| | ||| |||| || || ||||| || | Sbjct 1503028 CATGTCGCGTGCACGCACCTCCTCCTTGCCGGTGTTCTTCTTTAGATCCAGAAACTCGAA 1502969 Query 79476 GATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCC 79535 | ||| ||||||| || || || || ||||| || | ||| || ||| ||| || Sbjct 1502968 TACATCGCCGTGCCATGGTTCGAGGTATATGGCAAAAGCTCCCGGCCGTTTGTTGCCACC 1502909 Query 79536 CTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGC 79595 ||||| || ||||| ||||| |||||| | || || ||||| || || | |||| | Sbjct 1502908 CTGGTCCACATACCGAGCCGTATTGTTGTACACGCGCAGCATTGGTACCAATCCGTTCGA 1502849 Query 79596 GACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTC 79654 | |||||||| ||| ||| || || |||| ||||| | ||| || | | Sbjct 1502848 AATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCACGAAT-ACAGTGCACGTTCAGCC 1502790 Query 79655 CGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCT 79714 | || || || | | || || || ||||||||| ||| ||||| |||||||| || | Sbjct 1502789 CAATTCCGCCAGCAGATTTTGAAATCAGCGCGCACTGCTTCAGCGTGTCGTAGATACCTT 1502730 Query 79715 CGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGG 79764 | || |||||| ||| | | ||| || ||| |||| ||| ||| Sbjct 1502729 CAATACTGTCGTCAGACATGGTTAGCAGAAAACAGGATGACAACTGCGGG 1502680 >seq112 Length=21277816 Score = 105 bits (116), Expect = 7e-18 Identities = 109/140 (78%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 59980 AACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGT-GCT 60038 ||||| || |||| ||||| || ||||||||||||||| || | | | || || Sbjct 19493461 AACGTGTCGTAGCGTTTGCGGCTGTCGAAGGAATCTTCTTCAGCGG-TAGCTTTGCCGCC 19493403 Query 60039 ATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATT 60098 ||||||||||| || ||||| ||||| |||||||| |||| ||||| |||||||||||| Sbjct 19493402 ATTTTCTGGCTAAAGAAGCGAGGCCTTATGCCGGGACTGACCTTCTCGAACGAGCTGATT 19493343 Query 60099 TCCCGGGACGAGGGCCTCCA 60118 || || ||||| || || || Sbjct 19493342 TCACGCGACGAAGGACTGCA 19493323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548520151252320